<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10819

Description Uncharacterized protein
SequenceMSGQYPGGYNNPLAGHRGQFNPQQQQQQQQQQQMMNQMQMYGQTGAGMMPQGMSAGGGGMGPGVMNPVGMQSPSHVQQQMLQQQQMQQQQQMGGVGGPQMGGMGMGHVGMGGGVPQSSLGGGMMPQQPQLSPAMQQVGMQQQSHMQNVPNPNAMTMMAQQQQPQTSALPQQQQQMMQNAGPQQMVPNTVQSQQQQTQQQQQPTGQPQTSNNMLSISQQPHKEINIVQLSRVGQETVQDITSRFQEIFTALKVIQPTASRDNGTVKKVQEHFRTIRLLFKRMRLIYERCSDGYPQGMEYTHVESLIPYKDETEHRNLEATQCEEYRKAIQENQELIDIVKLKNRQLREIIDRTRIIVWEINTMLSMRRS
Length368
PositionHead
OrganismStomoxys calcitrans (Stable fly) (Conops calcitrans)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Muscoidea> Muscidae> Stomoxys.
Aromaticity0.04
Grand average of hydropathy-0.873
Instability index65.86
Isoelectric point9.10
Molecular weight41394.57
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10819
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     292.10|      49|      50|      22|      70|       1
---------------------------------------------------------------------------
   22-   70 (109.12/33.36)	PQQ.QQQQ.....QQQQQMMNQMQMYGQTGAGMMPQGMSAGGGGMGPGVMNP.....VGM
   73-  123 (81.75/22.91)	PSHvQQQM.....LQQQQMQQQQQMGGVGGPQMG..GMGMGHVGMGGGV..PqsslgGGM
  125-  154 (55.08/12.73)	PQQ.PQLS.....PAMQQVGMQQQSH.......M.QN...........VPNP.....NAM
  158-  190 (46.16/ 9.32)	AQQ.QQPQtsalpQQQQQM...MQ...N..AG..PQQMV.......P...NT.....VQ.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.82|      23|      26|     223|     246|       3
---------------------------------------------------------------------------
  223-  246 (33.57/25.35)	INIVQ..LSRvGQETVQDITSRFQEI
  250-  274 (33.24/20.32)	LKVIQptASR.DNGTVKKVQEHFRTI
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10819 with Med30 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MSGQYPGGYNNPLAGHRGQFNPQQQQQQQQQQQMMNQMQMYGQTGAGMMPQGMSAGGGGMGPGVMNPVGMQSPSHVQQQMLQQQQMQQQQQMGGVGGPQMGGMGMGHVGMGGGVPQSSLGGGMMPQQPQLSPAMQQVGMQQQSHMQNVPNPNAMTMMAQQQQPQTSALPQQQQQMMQNAGPQQMVPNTVQSQQQQTQQQQQPTGQPQTSNNMLSISQQPHKEINIVQLSRV
1
231










Molecular Recognition Features






MoRF SequenceStartStop




1) GYNNPLAGH
8
16