<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10816
Description |
Mediator of RNA polymerase II transcription subunit 15 |
Sequence | MAEDWQSQKFRQNVIAKINEMLQNTNQDGSKNAGVMENHIFKKSKSKDEYLGLVAKLFMHFKDMSRRPQQAPPPNVEIPQQNMMQDPLNALQNLASQGNRNPQMMSMPGGPNAQQGGGPGGPVPASNLLQTLNQQRPGMQPMQVIRPQMAMGAVGPGQQQGNIGPGQQQMMAGPMGVQMNAMGGPAGGPNQQMVNSAQMGGPVVGSGGVGVGPGGPQGMPGQMNQMGGPGAIGSMGPNVGPGGPNQMQMSMQHPQLNQMINARMNQAGPGGPMNVAGHTGPNQGMQNMPPNMQQNQAGVGGSGGPMHMGNIGPGNAPQNQGPGGMANAPGPQGNLNQMLNMAPGMQKNPNIALGQGQQIFNVNRGVVGQQQFRQSPSPSTVASPAGNLNVQQQQQLQQQVVNNQQQQMQQQPNQAVGPQGALPNPQMIPSPALVPTSSPQMSGLMQNPNQRQQMRQSPSAPLNTPGQVAQNSPFNPQEDQLYREKYKQLTKYIEPLKRMVDKLSNDGNNAEGYRKMNKLLEILTNPSQRVPLETLLKCEKVLENMGINSYSGQTFGKSSNPLMEVISATLQSPLANHTLYRTFRPSLELLFGTDICAPPAKMAKPAEKPSTGDLDIPHVLQGEVARLDQKFKVSLDSSAQNNVKSIRLICRLDDEKLPWVPPVSINIPEDYPWSSPECSLIEQDYSATPFLNAVQNALIARIAKLPKLHSLSHLLDTWEMSVRQACSPNAVKPVCEFTALFGM |
Length | 743 |
Position | Tail |
Organism | Stomoxys calcitrans (Stable fly) (Conops calcitrans) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota>
Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Muscoidea>
Muscidae> Stomoxys.
|
Aromaticity | 0.04 |
Grand average of hydropathy | -0.611 |
Instability index | 55.61 |
Isoelectric point | 9.27 |
Molecular weight | 79797.13 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364148
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP10816
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
5| 227.48| 32| 32| 259| 290| 1
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170- 202 (36.56/ 8.01) MM......A.GPM.....GvQMNAMGGpaGGPNQQMV.NsaqMgG...P
226- 254 (37.66/ 8.52) M.......G.GPGaigsmG.P.NV.GP..GGPNQ.MQmS...M.Q..hP
259- 290 (71.04/23.90) MINARMNQA.GPG.....G.PMNVAGH..TGPNQGMQ.N...M.P...P
315- 343 (47.13/12.88) ..NAPQNQ..GPG.....G.MANAPGP..QGNLNQML.N...M.A...P
407- 435 (35.08/ 7.33) QMQQQPNQAvGPQ.....G.AL.........PNPQMI.P...S.PalvP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 92.08| 29| 32| 66| 94| 2
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68- 101 (46.56/15.47) PQQAPPPNVEIPQQNMMQDPLNALQNL...asqgnRN
439- 475 (45.52/14.95) PQMSGLMQNPNQRQQMRQSPSAPLNTPgqvaqnspFN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 88.59| 19| 32| 351| 371| 3
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102- 118 (32.87/ 9.44) PQMMSMP...GGP..NAQQG..GG
147- 167 (31.42/ 8.66) PQMAMGAvgpGQQQGNIGPG...Q
349- 369 (24.29/ 8.95) PNIALGQ...GQQIFNVNRGvvGQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.84| 15| 16| 509| 523| 5
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509- 523 (25.37/13.20) NAEGYRKMNKLLEIL
576- 590 (22.47/10.99) NHTLYRTFRPSLELL
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