<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10812

Description Protein bric-a-brac 1
SequenceMMENSHAWMGGSGSSLTADSYQYQLQSMWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFREGKDLKDEGIAAHMPPYGRHSQEPSLSYPGVSAQCPNGIPTPTPSGDQMAHEATAAAVAAVAHNIRQQMQMAAAQQQQQQQQQQQQQQQQHQSHGDVVGAGQGLFNLPPHLAGSGALPVPSGPGGMMLPKASISPALSSTSSSGAVGSMMGPRHAPSPCGPGLPVISQLPPGVAAALHMAGSPASRCDPSTLLSQQQQHQLQQLHLQQQHVLHQQQQQQQQQQQQQHKHHTHHQHPHHPAQHQLSYGQHHHLSLSHPSGSATMVGPPTHSHLQHPSSTATTTASSTKSSSSTVSPLRRSSPSHSVSPLTELGLEMAFKPARPFSPSRLFADDIADIVGAAAAAAAAATNVSSTSSSACTTTATMTTATITASSSSSTYGLPTATGAGAMDSSSSSALGSVAISSATDAGGGMASSAAPTTSTATVVSSAASSSSSNISSTGIKLEPITTTSD
Length591
PositionKinase
OrganismStomoxys calcitrans (Stable fly) (Conops calcitrans)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Muscoidea> Muscidae> Stomoxys.
Aromaticity0.04
Grand average of hydropathy-0.458
Instability index62.16
Isoelectric point8.76
Molecular weight62012.35
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
DNA binding	GO:0003677	IEA:UniProtKB-UniRule

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10812
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     579.62|     135|     137|     163|     297|       1
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  163-  297 (242.74/72.20)	PSLSY..PGVSAQCP.NGIPTPT..PS...GDQMAHEATAAAVAAVAHNIRQ...QMQMAAAQQQQQQQQQQQQQQQQHQSHGDVVGAGQGLFNLPPHLA.GSGALPVPSGPGGMM....LP......KASISPA...LSSTSSSGAVG.SMMGP..RHAPSP
  303-  442 (173.61/49.82)	PVISQlpPGVAAALHmAGSPASRcdPS.....TLLSQQQ.......QHQLQQlhlQQQHVLHQQQQQQQQQQQQQHKHHTHHQHPHHPAQHQLSYGQHHH.LS..LSHPSGSATMV....GPpthshlQHPSSTAtttASSTKSSS....STVSPlrRSSPSH
  446-  585 (163.27/46.47)	P.LTE..LGLEMAFK.PARPF.S..PSrlfADDIADIVGAAAAAAAAATNVS...STSSSACTTTATMTTATITASSSSSTYGLPTATGAGAMDSSSSSAlGSVAISSATDAGGGMassaAP......TTSTATV...VSSAASSSSSNiSSTGI..KLEP..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     183.92|      53|      68|      21|      73|       2
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   21-   73 (98.24/66.60)	YQYQLQSMWQKCWNTNQNLMHHLRFR.ERGPLKSWRPETMAEAI.FSVLKEGLSL
   90-  144 (85.69/57.15)	YANRVHNMLGPSIDGGPDLRPKGRGRpQRILLGIWPDEHIKGVIkTVVFREGKDL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10812 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EGIAAHMPPYGRHSQEPSLSYPGVSAQCPNGIPTPTPSGDQMAHEATAAAVAAVAHNIRQQMQMAAAQQQQQQQQQQQQQQQQHQSHGDVVGAGQGLFNLPPHLAGSGALPVPSGPGGMMLPKASISPALSSTSSSGAVGSMMGPRHAPSPCGPGLPVISQLPPGVAAALHMAGSPASRCDPSTLLSQQQQHQLQQLHLQQQHVLHQQQQQQQQQQQQQHKHHTHHQHPHHPAQHQLSYGQHHHLSLSHPSGSATMVGPPTHSHLQHPSSTATTTASSTKSSSSTVSPLRRSSPSHSVSPLTELGLEMAF
147
456










Molecular Recognition Features






MoRF SequenceStartStop




NANANA