<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10803

Description Uncharacterized protein
SequenceMSVEEEVFKIQKKMGKITTDDGTGQEQALDLLKALQALNINLEILTKTRIGMTVNELRKSSKDDEVIALAKTLIKSWKRFLAPPSAGSKESSKSSSKSSSSSSKDKEKSSSSSSSSKDKKDDKKSSSSSAAKDERKTTQTSFPASSGLNDAVRLKCREMLCNALKVGEIPEGCPEPEEMASELEDAIYNEFKNTDMKYKNRIRSRVANLRDPKNPTLRSNYMCGAITAQQLAKMTPEEMASDEMKKVREKFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSSDEPMTTFVMCNECGNRWKFC
Length312
PositionUnknown
OrganismStomoxys calcitrans (Stable fly) (Conops calcitrans)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Muscoidea> Muscidae> Stomoxys.
Aromaticity0.04
Grand average of hydropathy-0.817
Instability index55.22
Isoelectric point9.12
Molecular weight34730.21
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
nucleic acid binding	GO:0003676	IEA:InterPro
zinc ion binding	GO:0008270	IEA:InterPro

GO - Biological Process
regulation of transcription, DNA-templated	GO:0006355	IEA:InterPro
transcription, DNA-templated	GO:0006351	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10803
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.43|      24|      26|      85|     108|       1
---------------------------------------------------------------------------
   85-  108 (39.55/17.85)	SAGSKESSKSSSKSSSSS.SKDKEK
  112-  136 (35.89/15.61)	SSSSSKDKKDDKKSSSSSaAKDERK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     118.31|      30|      59|     160|     191|       2
---------------------------------------------------------------------------
  160-  191 (45.90/30.44)	LCNAL..KVGEIPEgcPE.PEEMASELEDAIYNEF
  198-  221 (23.45/ 9.36)	YKNRIrsRVANLRD..PKnP.........TLRSNY
  222-  251 (48.96/25.83)	MCGAI..TAQQLAK..MT.PEEMASDEMKKVREKF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.77|      24|      26|     257|     280|       4
---------------------------------------------------------------------------
  257-  280 (40.62/29.98)	NDAQLATVQGTKTDLLKCGKCKKR
  285-  308 (44.15/33.22)	NQLQTRSSDEPMTTFVMCNECGNR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10803 with Med26 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PSAGSKESSKSSSKSSSSSSKDKEKSSSSSSSSKDKKDDKKSSSSSAAKDERKTTQTSFPASSGL
84
148










Molecular Recognition Features






MoRF SequenceStartStop




1) EVIALAKTLIKSWKRFLAPP
65
84