<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10799

Description Uncharacterized protein
SequenceMANMEKLNATLNAVKSLRSSVRQCFEQLADGTAAEQTEDNRTKFLVEFQENYSHINQQLREVETLINGLQPSLVSSYLGNTTYLAQEITQDRQAMYSQLVNSYKWIDKVHEHSLLAFNNLNLNNLRRSYTYCSQKRGRVQYTSCNNPDPEFIDNLFYNDISHTNTIYEVCRQFSSNAVVFATISHVLKAAIICKGVLIEWVTVKGYDEPMEIDDLWTESRYEVFRKVQEHTHSAMLHFFSPTQPELAVKSFMTWLNSYSKLFLEPCKRCGKYVSNGLPPTWRDLRTLEPFHEECKNC
Length297
PositionTail
OrganismMusca domestica (House fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Muscoidea> Muscidae> Musca.
Aromaticity0.11
Grand average of hydropathy-0.476
Instability index39.94
Isoelectric point6.15
Molecular weight34547.63
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10799
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.86|      16|      25|     253|     269|       1
---------------------------------------------------------------------------
  253-  269 (29.64/22.08)	TWlNSYSKL..FLEPCKRC
  280-  297 (29.23/17.04)	TW.RDLRTLepFHEECKNC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.48|      19|      24|     141|     162|       3
---------------------------------------------------------------------------
  141-  162 (32.08/29.19)	YTSCNNPDPefiDNLFYNDISH
  167-  185 (33.40/21.29)	YEVCRQFSS...NAVVFATISH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.84|      15|     116|     103|     117|       4
---------------------------------------------------------------------------
  103-  117 (29.19/22.36)	YKWIDKVHEH...SLLAF
  221-  238 (23.64/16.87)	YEVFRKVQEHthsAMLHF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10799 with Med27 domain of Kingdom Metazoa
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