<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10789

Description Uncharacterized protein
SequenceMDVDTLADVVFLVEGSSANGAYINELKTNYIVPTLEHFSQGPIEEREYLISERYSTQYCVVVYRTPANLLEPVCTTFGPYSSPQKVLDLFERLPLVGGGMESYANLAEGFATAHVCFDDMKEHRSGLRNEPTLNTQKHCILMCNSPPCLMPVMECWKYSGKTVEQLAALFHERKINLSIIAPRKIHVLFKIFMKADGDQPLAAKNYAKNIRHLVLLKGYHLKERPQSPNSAANAMVNQTNQVGGSNQVVQQQQQQQQAQQANVQQQQNQQNTGMQMDNSMGAVQQQQQQQNMQQQVAQMAAMSPNQQPGNTLNQQMLQQQQFNQNPNFQNQGNRWVFNPNQQQQQQPQTRPQFIGGPNVSGGPMVTPMGSVNQGMPGQNSALISQLSAPPNQNMNPMLQQQQQQIRMQMLNQQQMQQQLQQQQQQQNVMNPNMAVPGPGPNTQQQVSVANNQPNTSMANQQNQNKPKPTGMRDTIWSGTLEWVEKNKTDQQKITRTLQCTVTANIKDGEPEIKAVNWPSKLLMQLMPKHLVGIIGEQFLKESKMVVFKPQPCEALDALAKSMTTIFAGCVHFTTPANTPPCDIKVLILLYTADKNAFLGFIPNNQSLFVERLRKAIQQKQSMGMQQTATGGPPNNMQQQQQQQQQQQMQNPMAGQINTMGPGPGGINPQQQQQDPNQQQQQQQHQFNQYNPQQQMNMQMAGGPMNQQMMGGPPMGGGPDQMVGNNPMQQQMSMMQHQRMPMMAGGNPNQPQQQQMAPQQQMQRMVRPMMNNNNPGLRHLLQQQSTPGQQFRPQMGGGGPGGVPGMGGGMPNPNQMAGGPGGPSRPFDDNFDFM
Length833
PositionUnknown
OrganismMusca domestica (House fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Muscoidea> Muscidae> Musca.
Aromaticity0.05
Grand average of hydropathy-0.791
Instability index50.93
Isoelectric point8.89
Molecular weight92987.58
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10789
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             8|     735.13|      88|      88|     631|     718|       1
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  222-  277 (61.87/ 9.02)	..............KERPQSP..NSAANAMVNQTNQV......G.G.................SNQvvQQQQQQQQAQQ......ANVQQQQNQQNTGMQMD......................
  278-  363 (106.98/21.53)	...NSMG......AVQQQQQQ..QNMQQQVA.QMAAMSPNqqPGnTLN.QQmlQ..QQqfnQNPNF..QNQGNRWVFN.........PNQQQQQQPQTRP...QFIGGP..NV.S......GGP
  414-  479 (84.38/15.26)	......Q......MQQQLQQQ..QQQQNVMNP..NMAVPG..PG...................PNT..QQQVSVAN.NQ........P....NTSMA....NQQNQNKP.kPT.GmrdtiwSGT
  481-  575 (76.40/13.05)	...EWVE......KNKTDQQKitRTLQCTVTANIKDGEPE..IK.AVNwPS..KllMQ...LMPKH..LVGIIGEQFLKeskmvvFKPQPCEALDALAKSMT.TIFAGC..VH.F......TTP
  578-  632 (53.88/ 6.80)	TPPCDIKvlillyTADK..........NAFLGFI....PN..NQ.SLF.VE..R..LR...KAI....QQ..................KQSMGMQ.......QTATGGP...............
  633-  718 (180.87/42.03)	..PNNMQ......QQQQQQQQ..QQMQNPMAGQINTMGPG..PG.GIN.PQ..Q..QQ...QDPNQ..QQQQQQHQFNQ......YNPQQQMNMQMAGGPMNQQMMGGP..PM.G......GGP
  723-  774 (89.51/16.68)	G.NNPMQ......QQMSMMQH..QRM..PMMA.......G..G....N.PN..Q..PQ...Q...........Q....Q......MAPQQQM..........QRMV.RP..MMnN......NNP
  775-  826 (81.23/14.39)	GLRHLLQ......QQSTPGQQ..FRPQ..M.G.....GGG..PG.GV..PG..M..GG...GMPNP..NQ.........................MAGGP......GGPsrPF...........
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10789 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KGYHLKERPQSPNSAANAMVNQTNQVGGSNQVVQQQQQQQQAQQANVQQQQNQQNTGMQMDNSMGAVQQQQQQQNMQQQVAQMAAMSPNQQPGNTLNQQMLQQQQFNQNPNFQNQGNRWVFNPNQQQQQQPQTRPQFIGGPNVSGGPMVTPMGSVNQGMPGQNSALISQLSAPPNQNMNPMLQQQQQQIRMQMLNQQQMQQQLQQQQQQQNVMNPNMAVPGPGPNTQQQVSVANNQPNTSMANQQNQNKPKPTGMRDTIWSGTLEWV
2) QKQSMGMQQTATGGPPNNMQQQQQQQQQQQMQNPMAGQINTMGPGPGGINPQQQQQDPNQQQQQQQHQFNQYNPQQQMNMQMAGGPMNQQMMGGPPMGGGPDQMVGNNPMQQQMSMMQHQRMPMMAGGNPNQPQQQQMAPQQQMQRMVRPMMNNNNPGLRHLLQQQSTPGQQFRPQMGGGGPGGVPGMGGGMPNPNQMAGGPGGPSRPFDDNFDFM
217
618
483
833










Molecular Recognition Features






MoRF SequenceStartStop




NANANA