<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10773

Description Uncharacterized protein
SequenceMSGQYPGGYNNPLGGHRGQFNPQQQQQQQMMNQMQVYGQAGAGMMPQQGNPIQGMVGGGGGMNPVGMQSPSHVQQQLMQQQQQMQLQQQMGGVGGPQMGIGGMGHVGLGSGGVPQASLGGGMMQQQQPQLSPAMQQPNVGMQQQQQGSHMQNVPNVAAMAMMAQQQQQQQQHPQVPQQQQQQQQQLPQMMQNTGQQQQQQQQQQQQPQASNNVLSIPQQPHKEINIVTLSRVGQETVQDITSRFQEIFTALKVIQPTPSRDSGTVKKVQEHFRTIRLLFKRMRLIYERCSDGYPQGMEYTHVESLIPYKDETEHRNLEATQCEEYRKALQENQELIDTVKLKNRQLREIIDRTRIIVWEINTMLSMRRS
Length369
PositionHead
OrganismMusca domestica (House fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Muscoidea> Muscidae> Musca.
Aromaticity0.04
Grand average of hydropathy-0.915
Instability index64.21
Isoelectric point9.10
Molecular weight41615.61
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10773
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     265.09|      51|      53|     115|     166|       2
---------------------------------------------------------------------------
   13-   49 (62.23/13.44)	...L.GG.....HRGQFNP..QQ.....QQQQQMmNQMQ.VYGQAGAGMM...PQQG
   53-   89 (64.54/14.26)	QGMVgGGGGMNPVGMQ.SPSHVQQQL.MQQQQ......Q.........MQ...LQQQ
  115-  165 (91.59/26.22)	QASL.GGGMMQQQQPQLSPAMQQPNVgMQQQQQG.SHMQNVPNVAAMAMM...AQQ.
  166-  197 (46.73/ 7.98)	...........QQQQQQHP..QVPQ...QQQQQQ....QQLPQ.....MMqntGQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.69|      19|      26|     228|     247|       3
---------------------------------------------------------------------------
  228-  247 (27.37/21.24)	TLSRvGQETVQDITSRFQEI
  257-  275 (32.32/20.61)	TPSR.DSGTVKKVQEHFRTI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10773 with Med30 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MSGQYPGGYNNPLGGHRGQFNPQQQQQQQMMNQMQVYGQAGAGMMPQQGNPIQGMVGGGGGMNPVGMQSPSHVQQQLMQQQQQMQLQQQMGGVGGPQMGIGGMGHVGLGSGGVPQASLGGGMMQQQQPQLSPAMQQPNVGMQQQQQGSHMQNVPNVAAMAMMAQQQQQQQQHPQVPQQQQQQQQQLPQMMQNTGQQQQQQQQQQQQPQASNNVLSIPQQPHK
1
222










Molecular Recognition Features






MoRF SequenceStartStop




NANANA