<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10764

Description Uncharacterized protein
SequenceMMMMDTSTPMDGSSSTVISQTGSNSAGSGTGGGPTDLTGITAMDTTPPHDVNDQLAPPPTNGDGTTIQAAFTVVAMESTSNDIDMLSYKESRKHKKKKREKREKDRKHRDKDREHHRSDREHHRDKDREHHRDKEHRHHRHREHRGDNLDERTTTGATAGDYHNNLQQHHHHQQPLLTTSASSSPSSLSTLSASASPASCSSSSAGAGGGGGAGVGSSGSICVTNATATSYPHNLKIRFLLSGQKTELSPPAHQTIASSSNESATAQSNRDSSATAISLSTSNNSQTSASAASHHKSNEAKVNASSAGSSTGGGLATSSATTHKNSSTAAAAAAAAAKEREERYAAAQAALAAANGGSMSSTTATTSPSATGNVAAPSLYVSVPLSNANVPGINIPTTTAAGSTTGSQEQHITGQTTTRSTSQQQQLAAAAAAAAAASSTTSSPMDRQSPFNNSANSSTTSSIPSPVNQQHSSVIYQQPSGKSPNTHGTGAAGGAASSTGINLTASTTETGNLKISYEKQSSASSSSSRVSQIQDQETAPMRRSRSRSGESSMLQAQQQQHHQQQQHHQHQQQQHHHHHQQQQQQQQHTSSQKPTSRSAKKRAASAKSGFASSSSSSSGSNNNNNESIGGQPPQEKLAKTTSNASLSSADKMASSAASSPHYHADLTTPTPPPTAPSPLSLPPPSSTPTPSTRTPTPTSTPSSATPSPSPIVMLQQGAEHSNSSSSTNTSSASSSSASSTTPVSMRNLNSSPSASGGGGGGATTRSSPLPPPIINSSNSTTNIQQSTATNLSKNNSNSNTTMSGGGDHGNSTSAASSAGSSKISSSSSMGVSSSGGPSNSGSSLLSSSNNNNSSIVTNSSSGSSSGSNNANINLNDVAGNNNNNTTNISGGGGGLSSAKPLNKKMLRAHQTHLQQQQEQQRQQQNNSSSSGHKSQQQQHQQQRQQSPPPPPRGFTQRNVSPERNSSSSSSSKLPNHKMNNNSISSSSNTTTSSSSSSAINNSSTSSSALSNTTQQQNVNFANASNPSSSSSANSSSSSSNSSLVSATTTTTATNNNSSGTNLGSTANNTASTNNSNNSNNNKANTNKLNHQQQLQQQQPHHVVVGGHGNNKPTSSTSTSNRTPDSGVFSSSSFNVSNASTTSSCSSSTSMNMGGLKFSYEPQSGTGASFLPPPMDGSTSLVAAVKDSPPSSPGSEAGSSSTTTTAATTRKRGRRAKEANSNPATATSSSSSTSSSSTTTAQNTSIPNDLKDIKVFQNGLPPPSAPASNSSQQQPTTSAAAAAAAAAASSSSTQPAVTVTTAPHMLGNQLNPNSGMAQKLSDQLSMEIQDHNAYTGPEAVMPQFVGVPFPGKLRNTSTPSLAAPAAPPSTTSAVSAGPSPLASMFGSGANGSLAIPQSLEQLLERQWEQGSQFLMEQAQHFDIASLLSCLHQLQTENVRLEEHVSSLIARRDHLLAVNARLAIPLNATTNTSQSQAAAAAQQANNNAGATATMNSTTGHHSASSSSGSSASVTSSASSLATAASLATAATTSISGTTSSSTSRQPTPSGPMASVPPTSATGGGLSATERSRSNNNMENGLDFRQTNSLSNSNAMAMVSAGHGSSGMGRHHSAAAPGAIASNNSNNNNTSNNNNTNASNAQMLGSSAMLVQQQQQQQHHQQHLHMQPMPQQQQQQQPQHMPHHATHHAPPPPMPPQQQQQQSHHQQQHLQQQHATTTTLHQQQHHTHLSSHSTSSSSQNSSASNAISSSASTAQQQQQQLQQTLPHLMSTSRIGGNLSTNTNCLNPTTNLSGASRMAGGYHHSQVNSTTPTTNNNNNNNSSSNISSSSCAMKDGEHSSSAAGVSSGGSIQLQGGGVLSLTKSSHKIDNSLQHHHHHHQQQHHHLHHGQHGAGSIGAHFSSSSSTTSKISSCSSTSTTAKGGTNYPGPYKAHMQSQLRRDDNIPKAS
Length1944
PositionTail
OrganismMusca domestica (House fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Muscoidea> Muscidae> Musca.
Aromaticity0.02
Grand average of hydropathy-0.863
Instability index61.66
Isoelectric point9.74
Molecular weight199648.19
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10764
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     203.60|      16|      16|     555|     570|       1
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  555-  570 (36.96/14.21)	QAQQQQHH..QQQQHHQH
  571-  588 (33.85/12.30)	QQQQHHHHhqQQQQQQQH
 1650- 1662 (28.31/ 8.90)	QQQQQQHH...QQ..HLH
 1663- 1675 (23.61/ 6.01)	M...QPMP..QQQQQQQP
 1694- 1709 (31.49/10.85)	QQQQQQSH..HQQQHLQQ
 1710- 1725 (24.94/ 6.83)	QHATTTTL..HQQQHHTH
 1876- 1887 (24.43/ 6.51)	QQQHHHLH......HGQH
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|    1621.49|     588|     737|     418|    1154|       7
---------------------------------------------------------------------------
  163-  552 (334.58/43.78)	..........................................................................................................................................................................................................................................................................................................................................................................................................................HNNLQQHH..HHQQ......PLLTTSAS................................SSPSSLStlsasaspASCSSSSAGAGGGGGAGVGSSGsicvtnatatsyphnlkirfllsgqktelsppahQTIASSSNESATAQSNRDSSAtaISLSTSNNSQTSASAASHHKSNEAKVNASSAGSS...............TG...GGLATSSATThknsstaaaaaaaaakereERYAAAQAALAAANGGSMSSTTATTSP.....SATG.NVAAPSLYVSVPLSNANVPGINIPTTTAAGSTTGSQEQHITGQTTTR.STSQQQQLAAAAAAAAAASSTT.......SSPmdrQSPFNNSANSSTTSSipsPVNQQHSSViYQQPSGKSPNTHGTGAAGGAASSTGinlTASTTETGN....LKISYEKQSSASSSSSRVSQIQDQETAPMRRSRSRSGESS
  589- 1291 (891.47/146.14)	TSSQKPTSRSAKKRAASAKSGFASSSSSSSGSNNNNNESI..............GGQPPQEKlAKTTSNASLSSA.......................DKMASSAASSPHYHAdlTTptppptapsplslpppsstptPSTRTPTPTSTPSSATPSPSPIVMLQQGAEHSNSSSSTNTSSASSSSASSTTPVSmrnLNSSPSASGGGGGGATTRSSPLPPPIINSSNSTTNIQQS.TATNLSKNNSNsnttMSGGGDHGNSTSAASSAGSSKISS...SSSMGVS.SSGGPsnsgssllsssnnnnssivtnsssgsssGSNNANiNlNDVAGNNNNNTTNISGGGgglSSAKPLN.........................kKMLRAHQTHlqqqqeqqrqqqnnssssgHKSQQQQHqQQRQQSPPP.PPRGFTQRN................................VSPERNS........SSSSSSKLPNHKMNNNSISSSS..................................NTTTSSSSSSAINNSSTSSSA..LSNTTQQQNVNFANASNPSSSSSANSSSSSSNSSlvsatttttatnnnsSGtnlGSTANNTAST...................NNSNNSNNNKANTNKLNHQQQLQQQQPHHVVVGGHGNNKPTSSTSTSNRTPDSGVFSSSSFNVSNASTTSSCSSSTSMNMGGLKfSYEPQSGTGASFLPPPMDGSTSlvaavkdSPP...SSPGSEAGSSSTTTT...AATTRKRGR.RAKEANSNPATATSSSSSTSSSSTT...TAQNTSIPNdlkdIKVFQNGLPPPSAPASNSSQQQPTTSAAAAAAAAAASSSS
 1355- 1774 (395.44/49.29)	TSTPSLAAPAAPPSTTSAVSAGPSPLASMFGSGANGSLAIpqsleqllerqweqGSQFLMEQ.AQHFDIASLLSClhqlqtenvrleehvssliarrdHLLAVNARLAIPLNA..TT.....................NTSQSQAAAAAQQANNNAGATATMNSTTGHHSASSSSGSSASVTSSASSLATAAS...LATAATTSISGTTSSSTSRQPTPSGPMASVPPTSATGGGlSATERSRSNNN....MENGLDFRQTNSLSNSNAMAMVSAghgSSGMGRHhSAAAP.........................gaiASNNSN.N.NNTSNNNNTNASNAQMLG...SSAMLVQqqqqqqhhqqhlhmqpmpqqqqqqqpQHMPHHATH...................H........A....PPPPmPP.......qqqqqqshhqqqhlqqqhattttlhqqqhhthLSSHSTS........SSSQNSS......ASNAISSSA..................................STAQQQ......................................................................................................................QQQLQQTLPHLMSTSRIGGN...............................................................................................................................................................................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.00|      20|      21|     102|     122|       8
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  102-  122 (37.13/31.95)	REKDR.KHRDKDREHHRsDREH
  124-  144 (38.87/28.28)	RDKDReHHRDKEHRHHR.HREH
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.98|      23|      52|    1789|    1815|       9
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 1780- 1803 (38.12/11.19)	NCLNPTTN..........lSGAS.RMAGGYHHSQV
 1804- 1838 (23.86/ 7.82)	NSTTPTTNnnnnnnsssniSSSScAMKDGEHSSSA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10764 with Med15 domain of Kingdom Metazoa
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