<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10757

Description Uncharacterized protein
SequenceAVRMNSQRQQQAKPAVPASSSSSCSSSQQPQQQQAGKQPRAWMDADFRRQLSAQRERVEDAFEFEGRKVGRGSYGQVFKTKPRSCADASAGDYALKQIEGSGLSMSACREIALLRELKHPNVISLKQVYLAHETRQIWLLFDYAEHDLWRMINFHASAKKCNSQVSLPPNFTKSIMHQILCGIHYLHSNWVLHRDLKPANILVMGATSPERGRVKIADLGLARLFHQPLTPLTEIDPVVVTFWYRAPELLLGARHYTKAIDLWAIGCIMAELITDKPLFYCKQEEDIKTSSPYNRDQLERIFSVMGFPSQQDWRDLPHLPKYGDLVRNFGTGQQYARFSLGRHMSRSFGMSETSSEFRLLSRLLAMDPLRRPSAREALED
Length380
PositionKinase
OrganismMacrostomum lignano
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Platyhelminthes> Rhabditophora> Macrostomorpha> Macrostomida> Macrostomidae> Macrostomum.
Aromaticity0.09
Grand average of hydropathy-0.467
Instability index59.56
Isoelectric point9.34
Molecular weight43353.08
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10757
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.38|      12|      16|     327|     342|       2
---------------------------------------------------------------------------
  327-  338 (22.93/23.38)	RNFGTGQQYARF
  346-  357 (21.46/ 8.68)	RSFGMSETSSEF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.91|      15|      15|      62|      76|       3
---------------------------------------------------------------------------
   62-   76 (27.23/19.65)	FEFEGRKVGRGSYGQ
   78-   92 (26.68/19.11)	FKTKPRSCADASAGD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10757 with CDK8 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AVRMNSQRQQQAKPAVPASSSSSCSSSQQPQQQQAGKQPRAWMDAD
1
46










Molecular Recognition Features






MoRF SequenceStartStop




1) AVRMNSQRQQQAKPAVPASSSS
2) QAGKQPRAWMDADFR
1
34
22
48