Description | Uncharacterized protein |
Sequence | RNALCRLDAEKQGHSDTAETFLFHEARNGYLNGFLPCDQDDMVLISCLLATPSAQLTAVGWRTARAKRRVSRLPAGLTSAVAKRYSSSGLRRELEALSLSECHTRFLTVCRRLAVFNSVFFTGQLSTMSGEFSQHRAPRQPIQVFIGVNDIGLHLLGDPSKRFLYSFHYPNFNWSEIAPDTLEVRGTTKSGETTPMRLLSRQAMADRLTELQDAVNSQADNLYNALGILLQTAQPSPFPGVGGANRTGAAAGNQAPGGVDHARFFAEQITRTAQTIVALIDSPAGPRPTEPIRIRMAELEEENHRLGRHLIEVVDQLEARLRRVRACLTDIAQNSQIMYGPEPPPEFVDQPPSPSSSSKSSSKPAAGESSEATPAGLVIGPLPSEHRILDELRHAPRFQAAAAPNERQEKRSGAAREEWMLVPPETLASSLMTAGRKRPAGQPDKSWTRIGDGDEEAEAAPAEDAQAAAERRQQAALEMQGARLHDAEMERLAAAVGAGRRLPAAAVAAAAAQRAAGAGAASARGERKLRNGKRRRKRKKTRRRSLKRNGVESRPRRLRTVRPALAGVPFNRDTDMVVKGLDSKVKQSIVAKSQAGMASRFSHGGQKYL |
Length | 609 |
Position | Middle |
Organism | Macrostomum lignano |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Spiralia> Lophotrochozoa> Platyhelminthes> Rhabditophora> Macrostomorpha> Macrostomida> Macrostomidae> Macrostomum. |
Aromaticity | 0.05 |
Grand average of hydropathy | -0.518 |
Instability index | 60.95 |
Isoelectric point | 10.10 |
Molecular weight | 66343.32 |
Publications |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU366036 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP10752 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 219.46| 58| 62| 369| 428| 1 --------------------------------------------------------------------------- 364- 421 (99.29/41.78) PAAGE................SSEAT.....PAGLVIGPLPSEHRILD...ELRHAPRFQAAAAPNERQE...KRSGAAREEWML 424- 489 (77.00/34.97) PETLA................SSLMTagrkrPAG...QPDKSWTRIGDgdeEAEAAPAEDAQAAAERRQQaalEMQGARLHDAEM 490- 550 (43.17/15.20) .ERLAaavgagrrlpaaavaaAAAQR.....AAGAGAASARGERK.......LRNGKRRRKRKKTRRRSL...KRNG........ --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) AAVAAAAAQRAAGAGAASARGERKLRNGKRRRK 2) KSWTRIGDGD | 505 445 | 537 454 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab