<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10720

Description Uncharacterized protein
SequenceMADAADLQALRNELQRLREERTTTQIPGIVQAEQQRLGRYNTIGPPTTPSMSAAVAAASCAALRAVGLLWLLWLLRTALALAAAPASAASATASTRIGSGRAVLSVAAAAAGPSAAIFFVAPNALQVLVVLLLIIEVCLPPAAAAATASSAGGSATSASASTATVCTCLLLLLLLLWLRRFLLLLLLLRLLLRRRCSSSGVSLDASAASADSFSRRRMASRLDSQVGAGRSASAARSARKAAYSGVASRVPCFGFGLALLAPSVTWKGRQLDQSGRLDPLGIHEDVAIPLLAEGQQVLLVAQADVGPAEAELRVGRAVAKFAVLERQAANLGEEVGLRQAGRQAAENHLATPEPGGDLLIRTPCSLICKSARCAEFVDLFISFRRTDLKDLKELVAALPTERAKKASDTGQGTDSSRFEDAATEHACVCSHCGADIVTAGTKNIASAKPKTITTTEPGSFAAEPENVTTEEPVAKTAETIAAKGATAAGLQGLAKCKILREQYSHQEAVAVLQDVADQLHQNFCSDRRPPNRQLINAKIDWLFGQIKGLIICMACKLLALLVAVLLALRCLEGDSAELRAVEGGSVLLDCRIPSSTGTPRSDASAVKQLSLTKSNKLAFERHGNFPASLGSGYFHRLTVQSPSSRMHRFNLTHLRERDDGLYLCRVELENGDNSVQEFHLQLWLLPKFEANESAVLTRTLHRQAGEYVVLRCPKFRGRPQPTVSWLVNECPLANRGRVRIDRHLPEQLQVYNLNVNDSGRYACRIENPYGVSELDFTVLVGAGAAFIHRPPPSQTTALEGARLELPCGFHADPGLRARVDWQRAQPGSKLKLWTSLLSSPDASVAVGHQNSSLIFPALDHSHSGTYRCQVMVGSELHLTSRPSAVTVLHPPTLLPNSSRDQFLPLGQPGSLTCPVFANPPVDTTDWIRNSSPIGAAYLGRRYRFNLVTPSHSGRYRCRALQTASSFNTWSSWTPEFTVQTVQSPRFIARPLALYQLALGESVRMPCAFWAPSNVPTGLVWLRNGRRLDYRDRRLAYDPLDQELSVRDVQPDLEGTYTCALENPVLPLAASARLLVELTSPHPPANLTVVSVTPFSLHLTWQPAYDAGRAVHYTVWYRRLGDKTWNRQLADPPTATEATVTKLLADTAYELSLTSKSVGSSALEMRVRPETTAGRTAGYSPELADRPLPRDRSGRPWFPPIQRSLGPRPGPPVPASFDVVSAGVLCIAWQPPMSTPVPVLYYRLEVGVWDSRDGSLDKGDSWEEFAQVLQPKASLSIDAQPLLRVQAAQAAATQRRFRIAATSCALLSRSRRVVVADVDPSQLSELLPAGSAAAALASTGVNRVPAGAAWALLSCLLSFLVLAGALLGLTRSSARRSPRRIVVVNKNDDGSQQRRGKLNKQHTAADFLAAEPRGRQPQLRRHRCRTRRCCCRQQQLAATGASSEHPLLMASRRGQVDRPVSEPESGFLSDGRGGGSHSDDECPPEANDDEVSVSDIESTLPPGSWQVHGWSRRLPISVYLDSYHRIKRLRRANCSDNNVSLATVEPPSKFSVQSDVVRLPEPPQQPDGHARADLQPRHPALLDRASTTFACVVFFNLHLMKRLRIVDQLLAAFCNLWLVSYFVIVLGIVCVLAGAANDSSAVSATIGDSGASVGAKAATYLGVALLILGALLMLVFGLHFRLVKRQLDRDRLLRCARLGIRPASRYSALPDLPARPAIAALTAAPAGSDGCTNPAFVGVSTSEYPDVADSRPPAGSGESFSSASTSGIGSCSPASSSSGGSLAEPVVQLSVNQLQQHERHQQHQQHQQHQQHQQHQQHQQHQQHQQHQQHQQHSSSTSSTSSTSSTSSTSSTSSSSSSTSSTAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAQAAPAAPAASASSGTTAQLLLILGQKGVPFARQRVLVGVRLPPQVRVGVHPGLILPGVPALPAVSGGVAELRQGPLVSRRQEVLVWPLDFVFRFAFLKPSHLFNLLVGHSVPVVCIVRGLQMMLVVLARMPGKQGAGSAARPADVAEGCGHQVVLAQIVLQLTNSAKLMLEAQEHQVVLAQIVLQLTNSAKLMLEAQELQMSDSSRISAFPLPPMQYVNCYTDERVHSGTAPPPPRPLDSSYAMFGMPCTKEDAVIHSLESQGIRRLYPALYDHKRELKKLNFSILANYLDLMDIVVKCPDSQERLQKLEHMKTLFINVHHLINEYRPLQARDTLIEMLSLQSSVTHQSVDTASRYLARADAVVGRAAAASVGGDEDEPMRGADEAAGGEISQALLNDIDKLSAELSELTAAAAELDDAESAGFDLFASRGDDGNGDEAAGDSATDDVELEVDSDETSEDDDEADEAGEAVVNLPAGHQAAVGFSSTGNDAASGSLAQAPAAEAAPSAPPPLQMPPPPYSPEEGATNASNCSSRHLRGLVRAALEADEANGGVGGSEVVARYLDARRQLLAAHSDAAEDSLKQLAASLLENVNSRLLSLGVQLPDEGNEADEPTVAATELFRLPDGVRLFFVASDGRIRHGGSNSSLSLFVFDDAATASEAEQSQSAQPPAFITVGSHWRCPLIPGVTPVLASASGALIFPDLEAQDEASSVGVMLPEGLDTESRFLLLDLLACLSRLGIERQPEAPEKPPPYAPTPTPAVTPADADADQKPARRHTSDHLVTGIGWTAARMCEGAVAGGRLAGDLLTRARLAAQKRMRPAAAGSSAGSAAGSSAGSAAGNSNESANLDHVTTGVRLLRQGSAVGVRVSRRLVSGLVSGAGFLASRVVYPHAVAPALNAVGVSTSGRGSRSRLAGAARVAGAALSGASDVWESLGAAGSQLATCAADNGQALATHRWGDRAGAVTGDALHAGGNVARIAWATNALGVRAALKVVAMETGKEAVGRMAESDGAKAASAASGSAPSTGAKQAEMQEQVPEGDSRLISLKARKAVDKCAFTKQRNRLLKVLGSDGATLADVEPLAGTLDDHYERVSAVLQAILPEVVGNLPVQVQTVKELEKLETEYGEIVNLLRELRKREREVRLESREIEQKEMRQKELEAVRRQRIEMEEEERRMQQEFAERQRELDVRLDALRLAETSATRFHRWIGEARKEDSLRTLHRWLLTEAEYMTVACEAVRGVASSGETGRHDSVKAKKTVSRGAAAARSFFVKTNDSNSQNKEQAEGRKGCGLCGEQHGVWSCPRFQRMEPGARWATVRDKRLCFCCLGANHLAGACKRARVCGVDGCKANHNRLLHQRGPAATTANPHEGGSPKTIERPKSFQEKKSTVDIRSLDGAFRATVTAHTTEKVTGGMEAVDWSQLAKRWAHLRGVPFDKIKGKQTVDMLIGVDNADLHFACREVGGQPGEPIARLTPIGWTCVGPVNQVGTAEEQQQQTFFTVTAENEASDLLRKMWEIDERVFAWVLRFIRNCQTEKYQRSGGELLVDELEEVEERLVRLAQEEAFKTDTVNEKKLRCLQPVRDAAGVLRVDGRLKFRPQAPFAARHPSILPRKHWITKLIIKQYHEQQSHAEQAALMAALANKSSVALSRRCTTAHTSISSNSCALVPQRRALSASSSSGQQQGEQRRQRLRWLMRQTSLLRAVRLRYLLAAGAAAVAFESNRRYTEFKAGLPDAGWLTDRLRSFAELAANAGNGAVAKVRHVVDQKDHMHSAMQDFQSWLARHGSQTYASLVSTGSDSAKRASAVAASWFSFDSDGKQQQPQEQQPDEQLRQQMLELQAKYQRELESLESEVRALRSQLAEAKRASRSGGSGSVSVGGGGGRQLHKSLVELYSEVLDALSEHDSKFSVADHLPRVVVVGDQSAGKTSVLEMIAKARIFPRGAGEMMTRAPVQVTLAEGPYHVARFKDNPSREYDLTQESELAALRDTIERRMRSVVQSGGTVSAETISLSVQGPGLPRMVLVDLPGIISTETRGMASQTREAIRQLASQHMRNPNSIILCVADACVDPERSNAFDLVARHDPSGRRTIFVLTKLDLAERDRISPDRIGRLLAGRLLPLKALGYFAVVTGSGGADESIPAIQRYEEQFFRNSHRRFWALVQESVEAQADAFKASRFNLETEWKHMFPGRRQYSRAELFERARSDLLDEVIALSALPAKHWEDSLRAGLERSLTPQALDALLEFSALCNNGEDPSSHSAAAELQSRLDIWLRKWADTELPSQCVQTAWEELYAQLDGLPCQPDHDRVLEPLQAAVRAEARKAHRWDPKAEGALRVLQMAALDERAVPTRADWDGAVALLRRVLQRRLAEVESELAKSCGPGAWERWTRWRGRTEAQQRLVQLSNELRNCLLTGAAVGGRRNPAELSDEDLIAVRRNLLAQFALRCGLDSCAQCAKLYYHYQQRIGTAADCIAVPFFYRVGRMLDATSSALRQQIVNNEAHRLEKAVKSVLDAWADDPAKLREYLRGRSVQLAEDVQRLRLVEEKLDQFIEALNATKDPKRSRGNC
Length4467
PositionMiddle
OrganismMacrostomum lignano
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Platyhelminthes> Rhabditophora> Macrostomorpha> Macrostomida> Macrostomidae> Macrostomum.
Aromaticity0.05
Grand average of hydropathy-0.246
Instability index50.37
Isoelectric point8.47
Molecular weight482476.93
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro
mitochondrial inner membrane	GO:0005743	IEA:UniProtKB-SubCell

GO - Biological Function
GTP binding	GO:0005525	IEA:InterPro
GTPase activity	GO:0003924	IEA:InterPro
lipid binding	GO:0008289	IEA:UniProtKB-KW
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
apoptotic process	GO:0006915	IEA:UniProtKB-KW
mitochondrion organization	GO:0007005	IEA:InterPro
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10720
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.62|      16|      16|    1799|    1814|       1
---------------------------------------------------------------------------
 1799- 1814 (39.31/24.84)	HQQHQQHQQHQQHQQH
 1817- 1832 (39.31/24.84)	HQQHQQHQQHQQHQQH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      90.70|      16|      16|    1864|    1879|       2
---------------------------------------------------------------------------
 1864- 1877 (27.53/ 9.48)	....PAAPAAPAAPAAPA
 1878- 1895 (32.40/12.75)	APaaPAAPAAPAAPAAPA
 1896- 1913 (30.77/11.66)	APaaPAAPAAQAAPAAPA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.75|      21|      21|    2056|    2076|       3
---------------------------------------------------------------------------
 2056- 2076 (41.37/29.48)	HQVVLAQIVLQLTNSAKLMLE
 2080- 2100 (41.37/29.48)	HQVVLAQIVLQLTNSAKLMLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      33.15|      10|      15|    1834|    1845|       4
---------------------------------------------------------------------------
 1834- 1845 (14.23/13.66)	SSTSstSSTSST
 1852- 1861 (18.92/10.27)	SSSS..SSTSST
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.07|      25|      46|    1487|    1514|       5
---------------------------------------------------------------------------
 1487- 1514 (44.18/30.99)	DDEVSVSDIEstlPPGSWQVHGWSRRLP
 1535- 1559 (43.89/23.52)	DNNVSLATVE...PPSKFSVQSDVVRLP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     164.32|      39|      46|    2799|    2843|       6
---------------------------------------------------------------------------
 2728- 2762 (31.62/ 6.77)	AG.....SSAGSAAGSSAgSAAGNSNESANLDHVtTGVRL......
 2766- 2792 (29.73/ 8.10)	..............GSAV.GVRVSRRLVSGL..V.SGAGFL.ASRV
 2799- 2835 (53.67/23.25)	.......APALNAVGVST.SGRGSRSRLAGAARV.AGAALSGASDV
 2842- 2880 (49.30/29.76)	AGsqlatCAADNGQALAT.HRWGDR...AGA..V.TGDALHAGGNV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     406.71|     101|     102|    3920|    4021|       7
---------------------------------------------------------------------------
 3816- 3917 (129.38/74.40)	LPRVVVVGDQSAGKTSVLEMIAKARIFPRGAGEMMTRAPVQVTLAEGPYHVARfkdN....PSREYDLTQ..ESELAAlRDTIERRMRSVVQSGGTVSAETISLSVQG...
 3920- 4020 (161.17/95.60)	LPRMVLVDLPGIISTETRGMASQTREAIRQLASQHMRNPNSIILCVADACVDP...E....RSNAFDLVA..RHDPSG.RRTIFVLTKLDLAERDRISPDRIGRLLAGRLL
 4025- 4118 (116.17/71.04)	.....LGYFAVVTGS...GGADESIPAIQRYEEQFFRNSHRRFWALVQESVEA...QadafKASRFNLETewKHMFPG.RRQ...YSRAELFERAR..SDLLDEVIALSAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.58|      16|      17|    3099|    3115|       8
---------------------------------------------------------------------------
 3099- 3115 (26.20/19.29)	RlAETSATRFHRWI.GEA
 3116- 3132 (25.38/13.46)	R.KEDSLRTLHRWLlTEA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.86|      17|      17|    3038|    3054|       9
---------------------------------------------------------------------------
 3038- 3054 (28.70/17.62)	ELRKRERE.VRLESREIE
 3057- 3074 (26.16/15.29)	EMRQKELEaVRRQRIEME
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.92|      16|      17|    1327|    1343|      10
---------------------------------------------------------------------------
  140-  156 (23.51/ 6.83)	PPA.AAAATASSaGGSAT
 1327- 1343 (24.41/11.23)	PAGsAAAALAST.GVNRV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.45|      17|      17|    1158|    1174|      11
---------------------------------------------------------------------------
 1158- 1174 (29.96/14.48)	G.SSALEMRVRPETTAGR
 1177- 1194 (27.48/12.61)	GySPELADRPLPRDRSGR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     129.38|      25|      25|    2322|    2346|      12
---------------------------------------------------------------------------
 2297- 2321 (26.08/10.28)	SQALLNDIDKLSAELSELTAAAAEL
 2322- 2346 (43.02/22.26)	DDAESAGFDLFASRGDDGNGDEAAG
 2351- 2373 (33.69/15.66)	DDVELE.VDSDETSEDDDEADE.AG
 2380- 2402 (26.59/10.63)	PAGHQAAVG.FSSTGNDAASGSLA.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.84|      13|      17|    1593|    1609|      13
---------------------------------------------------------------------------
 1593- 1605 (23.94/17.84)	FFNLHLMKRLRIV
 1612- 1624 (25.90/ 9.30)	FCNLWLVSYFVIV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      98.52|      25|      49|    1916|    1942|      14
---------------------------------------------------------------------------
 1916- 1942 (35.32/26.56)	ASSGTTAQLLLiLGQkGVPF..ARQRVLV
 1950- 1967 (31.48/14.82)	VRVGVHPGLIL.PG...VP.......ALP
 1968- 1990 (31.72/15.00)	AVSGGVAEL....RQ.G.PLvsRRQEVLV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     218.89|      54|     118|     574|     629|      15
---------------------------------------------------------------------------
  574-  629 (83.82/43.70)	DSAEL.RAVE...GGSVLLDCriPSSTG........TPRSDAS.AVKQLSLTKSNKLAFERH......GNFPASL
  633-  691 (60.73/26.41)	YFHRL..TVQ...S.........PSSRMhrfnlthlRERDDGL.YLCRVELENGDNSVQEFHlqlwllPKFEA.N
  692-  748 (74.34/33.91)	ESAVLtRTLHrqaGEYVVLRC..PKFRG........RPQPTVSwLVNECPLANRGRVRIDRH........LPEQL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     131.52|      45|     119|      64|     115|      16
---------------------------------------------------------------------------
   68-  115 (69.23/47.43)	LLWLLWLLRTALAL...............AAAPASAASATA.STRIGSGRavLSvAAAAAGPSA
  172-  232 (62.29/28.98)	LLLLLWLRRFLLLLlllrlllrrrcsssgVSLDASAASADSfSRRRMASR..LD.SQVGAGRSA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     128.68|      43|      49|     392|     440|      17
---------------------------------------------------------------------------
  392-  440 (65.57/46.41)	KELVAALPteraKKASDTGQGTDSSRFEDAATEH.....ACVCSHCGAdiVTAG
  442-  489 (63.10/31.81)	KNIASAKP....KTITTTEPGSFAAEPENVTTEEpvaktAETIAAKGA..TAAG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     129.17|      37|     125|    1080|    1125|      18
---------------------------------------------------------------------------
 1083- 1125 (60.47/57.57)	PANLTVVSVTpfSLHLTWQPAYdagrAVHYTVWYRRLGDKTWN
 1213- 1249 (68.69/37.74)	PASFDVVSAG..VLCIAWQPPM....STPVPVLYYRLEVGVWD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     160.85|      52|     125|    3477|    3538|      19
---------------------------------------------------------------------------
 3477- 3538 (72.42/73.88)	KLRCLQpvrdAAGVLRVDGRLKfRPQAPFAARhpsiLPRKHWITKLiIKQYHEQQSHAEQAA
 3608- 3659 (88.43/55.89)	RLRYLL....AAGAAAVAFESN.RRYTEFKAG....LPDAGWLTDR.LRSFAELAANAGNGA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     136.83|      41|     129|    3551|    3591|      20
---------------------------------------------------------------------------
 3551- 3591 (68.75/47.99)	LSRRCTTAHTSISSNSCALVPQRRALSASSSSGQQQGEQRR
 3684- 3724 (68.08/47.42)	LARHGSQTYASLVSTGSDSAKRASAVAASWFSFDSDGKQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     124.25|      28|     129|     791|     818|      21
---------------------------------------------------------------------------
  791-  818 (51.38/25.67)	PPSQTTALEGARLELPCGFHADPG.LRAR
  841-  867 (29.28/11.16)	DASVAVGHQNSSLIFPALDHSHSGtYR..
  919-  943 (43.59/20.55)	PPVDTT..DWIRNSSPIG.AAYLG.RRYR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.03|      21|     102|    4120|    4141|      22
---------------------------------------------------------------------------
 4120- 4141 (33.16/26.14)	AKHWEDSLRAGLeRSLTPQALD
 4224- 4244 (37.87/24.92)	AHRWDPKAEGAL.RVLQMAALD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.91|      11|      19|    3224|    3235|      25
---------------------------------------------------------------------------
 3224- 3235 (21.14/19.10)	KRLCFC....ClGANH
 3241- 3255 (17.77/ 9.28)	KRARVCgvdgC.KANH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.76|      19|      47|     952|     972|      26
---------------------------------------------------------------------------
  952-  971 (32.05/15.81)	SGRYRCrALQTASSFNTWSS
 1001- 1019 (36.71/ 9.93)	SVRMPC.AFWAPSNVPTGLV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     112.13|      32|      47|    3140|    3171|      27
---------------------------------------------------------------------------
 3140- 3171 (50.25/28.56)	EAVRGVASSGETGRHDSVKAKKTVSRGAAAAR
 3186- 3217 (61.87/37.27)	EQAEGRKGCGLCGEQHGVWSCPRFQRMEPGAR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      95.59|      23|      26|    2894|    2916|      29
---------------------------------------------------------------------------
 2894- 2916 (36.85/21.46)	AALKVVAMETG.KEAVGRMAE..SDG
 2922- 2944 (24.51/11.36)	AA.SGSAPSTGaKQA..EMQEqvPEG
 2955- 2977 (34.23/19.31)	KAVDKCAFTKQ.RNRLLKVLG..SDG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.31|      20|     125|    1632|    1651|      30
---------------------------------------------------------------------------
 1632- 1651 (33.84/19.96)	AGAAND.SSAVSATIGD.SGAS
 1753- 1774 (25.47/12.65)	AGSGESfSSASTSGIGScSPAS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.62|      17|      19|    1446|    1463|      31
---------------------------------------------------------------------------
 1446- 1463 (25.85/16.42)	LLMASRRG..QVDRPvSEPE
 1466- 1484 (28.77/14.07)	FLSDGRGGgsHSDDE.CPPE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.95|      12|      47|    2555|    2566|      34
---------------------------------------------------------------------------
 2555- 2566 (20.47/ 9.82)	FVFDDAATASEA
 2603- 2614 (19.48/ 8.92)	LIFPDLEAQDEA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10720 with Med7 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ASSEHPLLMASRRGQVDRPVSEPESGFLSDGRGGGSHSDDECPPEANDDEVSVSDIES
2) ESAGFDLFASRGDDGNGDEAAGDSATDDVELEVDSDETSEDDDEADEAGEAVVNLPAGHQAAVGFSSTGNDAASGSLAQAPAAEAAPSAPPPLQMPPPPYSPEEGATNASNCS
3) GRMAESDGAKAASAASGSAPSTGAKQAEMQEQVPEGD
4) IERQPEAPEKPPPYAPTPTPAVTPADADADQKPARRHTSDHL
5) PRRIVVVNKNDDGSQQRRGKLNKQHTAADFLAAEPRGRQPQL
6) RLLHQRGPAATTANPHEGGSPKTIERPKSFQEK
7) RMRPAAAGSSAGSAAGSSAGSAAGNSNESANLDHVT
8) TSEYPDVADSRPPAGSGESFSSASTSGIGSCSPASSSSGGSLAEPVVQLSVNQLQQHERHQQHQQHQQHQQHQQHQQHQQHQQHQQHQQHQQHSSSTSSTSSTSSTSSTSSTSSSSSSTSSTAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAQAAPAAPAAS
1440
2325
2909
2645
1377
3257
2722
1740
1497
2437
2945
2686
1418
3289
2757
1915










Molecular Recognition Features






MoRF SequenceStartStop




NANANA