<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10687

Description Uncharacterized protein
SequenceMSMIDNEFREKVAQKREKVDDLYHYRGQKIGSGAYGQVYKAISKDPNVKNIYALKLIDGQGTNGIAMSVCREISLVMELKCVNIIKIHRIFFAPEKKIWLLFDYAEHDLWHIIKYHRTMKVKKERVDVSASMIKSILFQILQGIDYLHENWILHRDIKPANILVMGEGIERGTVKIADMGFARIYHNPLKPLTHIDPIVVTYWYRSPELLLGTKHYTKAIDLWAIGCIFAELMISEPIFYCPDEDTKASTPYNKGQIRRILQILGYPNEADWKDIKHMPNYTKFLQDFNKTHFTNCCLKKYIVDKHKIKYDTREYVLLKNLLIMDPIKRITAAEALSDEFFRNEPEATKDVFNGLPIPYPKREFIIDKGDDLLTNLDFELSQPPKIQLPPKKLMEIDGENCRKQDVKVSISGENLVQCQRKRPLHNRTIEEEIAEHQRMIERQQQHDLIQNPQQLEFNQYPQQQQFNQQQQLDQQLQQQEMFWIQNQNYGCHQQEGPR
Length498
PositionKinase
OrganismRhabditophanes sp. KR3021
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Tylenchina> Panagrolaimomorpha> Strongyloidoidea> Alloionematidae> Rhabditophanes> unclassified Rhabditophanes.
Aromaticity0.10
Grand average of hydropathy-0.562
Instability index42.13
Isoelectric point8.18
Molecular weight58706.07
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10687
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.19|      25|      27|      65|      89|       1
---------------------------------------------------------------------------
   65-   89 (43.74/36.62)	IAMSVCREISLVM...ELKCVNIIKIHR
   90-  117 (43.45/36.32)	IFFAPEKKIWLLFdyaEHDLWHIIKYHR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.58|      15|      27|     443|     457|       2
---------------------------------------------------------------------------
  443-  457 (28.17/16.12)	QQQHDLIQNPQQLEF
  467-  481 (27.42/15.51)	NQQQQLDQQLQQQEM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.02|      24|      27|      11|      36|       4
---------------------------------------------------------------------------
   11-   36 (37.48/30.47)	KVAQKREKVDDLYHYRgqKI.GSGAYG
   40-   64 (36.55/22.62)	KAISKDPNVKNIYALK..LIdGQGTNG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10687 with CDK8 domain of Kingdom Metazoa
Unable to open file!