<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10656

Description Uncharacterized protein
SequenceMPASALEEDLLEISKKLTRMSKDVDRQLGGAIDLIEALEKMPVNIEVLTKTRIGMVLNDFRKKVEDEKLAKRCKALIKRWKALLEEKAAQSRSSTRSRSPDETKTSVVDNKRGDLSGSAAVTSKARPMMNGTSSGGTDVRSKSVEMLLNALRSGEIPNGTLDPEDLAKRIEKRLFDFHNGTGDKYKSALRSRVFNLRDKKNQALRENVLTGAVGAEKFATMTTEEMASEEMKKTREMFTKEGILEHQMSVQEEFNKCGRVYLSSSDESETQARRLLTRLVTDPSSSSQVEAIDCPSEMLARWPMLATEDVKLAVFSPLDATIDVSGLSRILADNCKEMGVQIFENCSIKKVLLNEESRVYAVDTDEGFIDVMAFVDAAGIDSSLVDVLGLPDADHPVRIAAHPCSFTFLSTDPLPHCQSSSQSQPIFVCMDENTYICPLKTRTVCGGFTMGGDLQALPPSSQTSKGTVTEWNMPTPVWDNFRIILRHLINRCPQLAQLPRGELMTSAEMYTPDMKPLIGESDQAKGFFLATGLNGQGVSFAGGLGSLLAEWILGGSSSIPNPLSSHQCHTARNLRTSPIHHSLRDAGAVFAEIMGYERPLWYNTTSVPDQDHDGPRLPRQSNFSGEDQLIGKPKWFPLVSKEYSTCRERVGLIDMTSFSKFDIQGADVVPLLQRLCSGNIDCPVGTYFIVAPTVQQVRLALWIKKWANEWKMNIQLQDVTNSFTALDIVGPASRALISEVTGKTMSPNEFPSFSFREMHIGLAGPIRVISVTHCGELGWMLYIPNELAQNVYEQLMEAGSLHGLKHCGYYALRHLRIEKFYVYWGQDIGSGTTPVECGRAFRVDFDKEFIGKEALQKQLDRGVNKRFVQLLLENHNLESDPWPHGEEPIYRNGKLAGWTTTAAYGFTLGCHVCLGYIENKEFGLTTEFLNKGSYEVELAGKRFTCKVNLHSPTLPMYSSEHPQHYRPTQ
Length969
PositionUnknown
OrganismMeloidogyne hapla (Root-knot nematode worm)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Tylenchina> Tylenchomorpha> Tylenchoidea> Meloidogynidae> Meloidogyninae> Meloidogyne.
Aromaticity0.08
Grand average of hydropathy-0.333
Instability index48.60
Isoelectric point6.12
Molecular weight107908.90
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
oxidoreductase activity	GO:0016491	IEA:InterPro

GO - Biological Process
transcription, DNA-templated	GO:0006351	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10656
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     316.45|     115|     386|     112|     315|       1
---------------------------------------------------------------------------
   78-  134 (50.58/78.71)	KRWKALLEEKAAQSRSSTRSR....................................................................................................................................spdetktsvvdnkrgdlsgsAAVTSKARPMMNGTSS
  172-  315 (122.63/139.64)	KRLFDFHNGTGDKYKSALRSRvfnlrdkknqalrenvltgavgaekfatMTTEEMASEEMK.......KTREMFTKEGILEHQMSVQEEFnkcGRVYlsssdesetqARRLL..TRLVTDPSSSSQVEAidcpSEMLARWPMLATEDVKLAVF....................................
  504-  606 (143.24/67.70)	.................................................MTSAEMYTPDMKpligesdQAKGFFLATGLNGQGVSFAGGL...GSLL..........AEWILggSSSIPNPLSSHQCHT....ARNLRTSPIHHSLRDAGAVF....................AEIMGYERPLWYNTTS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.62|      23|     523|     138|     160|       5
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  138-  160 (40.64/24.61)	DVRSKSVEMLLNALRSGEI..PNGT
  662-  686 (37.99/22.56)	DIQGADVVPLLQRLCSGNIdcPVGT
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10656 with Med26 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AAQSRSSTRSRSPDETKTSVVDNKRGDLSGSAAVTSKARPMMNGTSSGGTDVRSKSV
88
144










Molecular Recognition Features






MoRF SequenceStartStop




NANANA