<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10653

Description Uncharacterized protein
SequenceMHQYFQRMQNRSQLSPDARPLKRHNRKSDSFRQSGGSEKTSGVVAVMHPDVFPQQEKQEEDNLGPDRLVRGYQIEVIHSALVRHEYDSLMKNARIFATDDQLYRAARWVKQIMNKKNELNVIWLDKNWIKENNVRGFISDCFREEFFESLVSGKRIQLKDIKRHSLAACFPRFLRTSYDQLNSLASAKMVPLCEAMSLLYEKGVPIQKAIWFLKMNQVAHPILVTASKQKKGGNILPSDDYSSDQRQFFIRYLRCLLREFDKAIPGQLEQNPYYQRWPYYAALIKHSFEDGMLDRHEFVLEMCELLAEFSNFSLDQPQTFRILIILMTQFTDIVTQNVFIARRLASILCTRLMQYKRDYEKMRSQNLSPIAPETCFDDLFNCQHHRPTLLVIFGFLHAIILDCPSALIWTPFEPQELLEGSLRNSKLSRAVEKENALQSVSWLCGSPLDFLPCKIEVTCQHFSSSFKNKMLGLLNKKVKEIKMRGLAVDDRWAFINPSNSQFGIETIIEECLNIISFLDTISLDKPNALQKLYDNIFPKDENLNESVGVNIRVRMLVLWAVTAERSGTYRSLIVTKLLLLLSKCQNKFGSLKSIHELLVDCLNRDWAFNERNKNGEAKDERWNMEFGNLMLLFYELQRVGLFDHDKYVCELMRNGTLGQSPLYQRLKATESSESQTERAEQLNSSKRQSVDLAPVKQEPQMIISFIPTTPSVPSSVNNNPFSGSTPQQKSDEFAKLQQEYEPDVHPYLDIKSKLSFHERFLLHLPVEQLESNRDACNQRAIVLYGISDQRDQVRQDLRKIAREICKLWKRLSVEIVQPSPDSPNRELRYKRKCTNEQIIEQIDKFKSQTFFDQLIICGWCTENFVDSIEEFLRQLTEQQTILSPFPTSECLDILCEMITICKNPHSLLTLSTELLPFLIQIEQEFRKSNQKIIIDTFPNSLTSQLAYVIVVRLVEHFYYFLYSPEAFSIYNSLFKLIQTDLELSKQQFPINCWSRTIAIFLLYTRNKLIGIGGEEGKTTNLLGKYEDLASIFPSAGSGSLARNLKYDQQLMVDQLNLSSSNNFRFLSYQDLKMRLQTMQNEHSKYSFVVNAFRAANSYGRDYERLVELANYCAHVSTQLGLETEWCSAIQELCCSNISNNSNWNEMLFEINVNDFSTHYSLATFVLLLASKYAFSPHALICRLIANVFYSIIREEGGFANDDLDNGFCLALYICSVLVCGDDIPFICSDLGQRVITTSTLRRDCNQLALKIAHITELNLVLFPLLSVIMQLVDELKRKVEASRKDATNLRKFSKQLAIARCALLSICDQDWVIERMFSICSSDKDMDNFINCPRLKNHSVGQQLLRVALRRKRQFL
Length1356
PositionKinase
OrganismMeloidogyne hapla (Root-knot nematode worm)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Tylenchina> Tylenchomorpha> Tylenchoidea> Meloidogynidae> Meloidogyninae> Meloidogyne.
Aromaticity0.10
Grand average of hydropathy-0.269
Instability index49.80
Isoelectric point7.86
Molecular weight157029.83
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10653
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.07|      26|     115|     464|     499|       1
---------------------------------------------------------------------------
  469-  494 (48.08/34.80)	KMLGLLNK...KVKEIK.MRGLAVD...DRWAF
  576-  608 (30.00/10.43)	KLLLLLSKcqnKFGSLKsIHELLVDclnRDWAF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     158.91|      37|     398|     510|     572|       2
---------------------------------------------------------------------------
  390-  421 (52.53/18.25)	..LVIFGFLHAIILDCPSAL..IWTP.FEPQELLEGS
  510-  546 (64.95/67.51)	ECLNIISFLDTISLDKPNALQKLYDNIFPKDENLNES
  889-  916 (41.42/13.54)	ECLDILCEMITIC.KNPHSLLTLSTELLP........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.38|      29|     672|      53|      85|      11
---------------------------------------------------------------------------
   53-   85 (39.98/36.46)	PQQEKQE....EDNLGPDrlVRGYqIEvIHSALVRHE
  726-  758 (49.40/28.65)	PQQKSDEfaklQQEYEPD..VHPY.LD.IKSKLSFHE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10653 with Med12 domain of Kingdom Metazoa
Unable to open file!