<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10632

Description Uncharacterized protein
SequenceMLVDFVNHWLVNSNSMDDRFLTNVTTVINEIVFVYGMIPFERLLLALVMHPFETNAIRCSLAVIHTLLANSKELQSRLQFLTCNLVQHHTAVHMKSDGHFLKLTEYYNSAFLGHSNLSYNDQFRRMSAHHHQQDNVQDLTDHYLPVYYGNLADNILPIVDALFQRSLEVDIDPPNLHMFLQFFSPCYKFHXXXX
Length194
PositionTail
OrganismSteinernema glaseri
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Tylenchina> Panagrolaimomorpha> Strongyloidoidea> Steinernematidae> Steinernema.
Aromaticity0.12
Grand average of hydropathy-0.026
Instability index37.38
Isoelectric point6.01
Molecular weight22181.12
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10632
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     121.47|      36|      39|     112|     147|       1
---------------------------------------------------------------------------
  112-  147 (64.58/38.22)	LGHSNLSYNDQ.FRRMSAHHHQQDNVQDLTDHYLPVY
  151-  187 (56.89/32.92)	LADNILPIVDAlFQRSLEVDIDPPNLHMFLQFFSPCY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.24|      19|      23|      59|      81|       2
---------------------------------------------------------------------------
   59-   81 (26.65/25.67)	CSLAVIHTLLanskELQSRLQFL
   83-  101 (36.58/23.78)	CNLVQHHTAV....HMKSDGHFL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10632 with Med23 domain of Kingdom Metazoa
Unable to open file!