<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10623

Description Uncharacterized protein
SequenceMLNYQNDQNRTWLLSQKPFLNLLYTSLEGEDQLRDALVASVLKQFSEIANRARDSSGLPFSKQFKNEREGLIVRLSLCGGMFESMLSTADAWAFELFKLLFYEVITVDRDPLVYEMCYDMLSTLIIYTIIENHQNLDGEDPRSGSKYSPLDEQSNHSLASTFPNKYRGLMKKLSKELVDRSASLELRDLLKLMPIAKPLIDIPVVDTYGSSPTSNSKSSKNSSNSSQFSSAQGGSSSGAANQRISMRSGVQFNGRREQLTTYDFIQGYFPDHMPKHWKWSWFQGLKTERTPVPMQKQILRLLYHTHYLEYSRPAVVGQDRPPRADIFLTPPMTEEAPPPPHAVPTPHPPNIHGPMSAGPPAAGPQMPPGMGPMMPPNTSGAAADPSQMNPQNMPNSGPSAMPPSSMHNGFPGGAPHGMGHPMQGPAVMPGPHPEFPGMRPPFPGKPMGMMGNPQGMVGMGGLRGPHQQPVRAAVAAAGARKRNNPGGTKNTSKRRKDSKASIAAAMPDMQLAGSSSYWPNAAQGSFPGPQPGYMGQPAPGGAPMESHGQDSKAQLHEMLINRQKQAGANPGAQHSQNAFGPGGPGGAPHYPMMAQPDHQGGFTQNSGQTGQRYM
Length614
PositionKinase
OrganismSteinernema glaseri
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Tylenchina> Panagrolaimomorpha> Strongyloidoidea> Steinernematidae> Steinernema.
Aromaticity0.07
Grand average of hydropathy-0.633
Instability index50.57
Isoelectric point9.25
Molecular weight66657.82
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10623
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     460.63|      70|      70|     319|     388|       1
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  319-  388 (137.15/37.55)	DRPPRADIFLTPPMTEEAPPP...PHAVPTPHPPN.IHGPMSAGP.PAAGPQMPPGMGPMMPPNTSGAAADPSQM
  391-  449 (102.90/26.48)	QNMPNSGPSAMPPSSMHNGFPggaPHGM..GHP...MQGP..AVM.PGPHPEF.PGMRPPFPGK.......PMGM
  450-  501 (73.30/16.91)	MGNPQG.......MVGMG........GLRGPH.....QQPVRAAV.AAAGARKRNNPGG..TKNTSKRRKDSKAS
  502-  558 (82.17/19.78)	IAAAMPDMQL................AGSSSYWPNaAQGSFP.GPqPGYMGQPAPGGAPM.ESHGQDSKAQLHEM
  562-  606 (65.10/14.26)	.............RQKQAGAN...PGA...QHSQN.AFGP...GG.PGGAPHYP..M..MAQPDHQGGFTQNS..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.89|      12|      20|     132|     147|       2
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  132-  147 (14.46/17.38)	NHqNLDGEDPrsgSKY
  155-  166 (23.42/11.20)	NH.SLASTFP...NKY
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.47|      27|      38|      58|      86|       3
---------------------------------------------------------------------------
   58-   86 (42.37/37.38)	LPFSKQFKNEREGLIvrLSLCGGMFESML
   99-  125 (47.09/34.34)	LLFYEVITVDRDPLV..YEMCYDMLSTLI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.22|      13|      19|     167|     179|       4
---------------------------------------------------------------------------
  167-  179 (22.08/14.61)	RGLMK..KLSKELVD
  187-  201 (18.13/10.74)	RDLLKlmPIAKPLID
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     100.83|      29|     276|       9|      38|       6
---------------------------------------------------------------------------
    9-   38 (47.25/34.68)	NRTWLLSQKPFLNLLYTSLEGEDQlRDALV
  288-  316 (53.58/35.01)	ERTPVPMQKQILRLLYHTHYLEYS.RPAVV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10623 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) SRPAVVGQDRPPRADIFLTPPMTEEAPPPPHAVPTPHPPNIHGPMSAGPPAAGPQMPPGMGPMMPPNTSGAAADPSQMNPQNMPNSGPSAMPPSSMHNGFPGGAPHGMGHPMQGPAVMPGPHPEFPGMRPPFPGKPMGMMGNPQGMVGMGGLRGPHQQPVRAAVAAAGARKRNNPGGTKNTSKRRKDSKASIAAAMPDMQLAGSSSYWPNAAQGSFPGPQPGYMGQPAPGGAPMESHGQDSKAQLHEMLINRQKQAGANPGAQHSQNAFGPGGPGGAPHYPMMAQPDHQGGFTQNSGQTGQRYM
2) SSPTSNSKSSKNSSNSSQFSSAQGGSSSGAANQRISMRSGVQF
311
210
614
252










Molecular Recognition Features






MoRF SequenceStartStop




NANANA