<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10555

Description Uncharacterized protein
SequenceMGVINEEKQQTDIGWVTSLVTRTHAEGLSSIEFGAFLKKRIIMSGCNEQHCRAIASMLLRFATASVTPDQRMLSCLEALVKAEVLRWAVFIEVIAEFRQFSREYCIEALATILRNSVPLLKCNYTSEKECLELSGSLMTVLNWCLLALEYSLKNENKRSTQALIHCACAYANSKFVRALLYIHEHIGAESVNYVVEAAVSFAQSYPDCGELKTMIEALQQFGTSPAERIEDNLGGLVKQSHPAILTLVSVFEGFRMTKKVDQMADSFFELAEILEFPFPKMFEDMIRASLLIMLDAKESLGEELVASQAFYYVKLPQIVKHLLILGAPLNDLITALDTICDNKTLLNQVDMKTKTNTFQHLLEQMATAGVIDEGVMKSLLEKRSQYWPELFQMFAQTSTTPVHQPLILRANSAKMAVDKILRQPNNAVINVLLKLASGSGGLFTFDSVCASFCADGNLTYFSSKLAMINGQSERPAEGLDMDDERQRALAFNLSFILLTRIRFIYDDLRPSELVNGTVRGMDNTQSCFYKFASQYGWTAADSCGLSNVYTNEQKAAFVDRVNTLKRAQPFWDPRTVNYAELVDFVPIIGEILLDDFKMTKFENYEHLHENVKNVLHAFRDDANFMIVCLVQWMCSQPVTSSRQSLVKSFIRALEYPHQLNHTQQERMVLTSATCRRTLDDLSICDRLRDPRFTWIINCAKRKLPTVPFTLPATNAQSSDAEMLKQAFTYARQQAWGSPNVLQLVDRCNKAGVVENWCMVWLNAMLKLSTNDEMLCASELCLAAGIMSPVPCMLSFARSITEYIFEQNVDFGCVEPKALVSARFLVHCLQLAMHAYWRQQKERQTRIVRGECVERKRSDGDDDGETDEGNPVERSVLVIFEKFVRETRAGHLKSTITFIYHFVVSLSTAPQNAATRRIIELLPHDLMVNLARLDPQTFNLDLFLPLINLCDVASTKSALQFTCLLRKLGGF
Length970
PositionTail
OrganismLoa loa (Eye worm) (Filaria loa)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Spirurina> Spiruromorpha> Filarioidea> Onchocercidae> Loa.
Aromaticity0.09
Grand average of hydropathy-0.020
Instability index46.87
Isoelectric point6.03
Molecular weight109659.50
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10555
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.58|      20|     704|      58|      99|       3
---------------------------------------------------------------------------
   58-   77 (35.68/46.59)	LLRFATASVTPDQRMLSCLE
  362-  381 (33.89/ 8.33)	LEQMATAGVIDEGVMKSLLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     176.17|      56|     611|     140|     201|       7
---------------------------------------------------------------------------
  140-  200 (90.39/71.31)	VLNWCLLALEYSLKnenkRSTQALIHCA.....CAYANSKfVRALLY....IHEHIGAESVNY.VVE..AAVS
  753-  820 (85.78/49.76)	VENWCMVWLNAMLK....LSTNDEMLCAselclAAGIMSP.VPCMLSfarsITEYIFEQNVDFgCVEpkALVS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10555 with Med24 domain of Kingdom Metazoa
Unable to open file!