<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10457

Description LAFE_0C01002g1_1
SequenceMIPSKYTLTPPEDLHPLNFEGSKPIYPDFDPWSHTQLEDKILLNFVSKGYYNSAKVNFESISARSSLQESLPTVSTLLADQLSNVLHIREQDINKISSVALDANSKRVKFNELAGPGFSLPTRVTLTDHRRELWLQEISSPHASLSNISKSIPHGLKRRQVLEQCFTKQIPISRAVWLIKCSYSIEWKILTSKQKHESSDEITNHLYKEWTDNMAHILEKLVFEMTQYYNEPIQLRAWKKKISYYLKLLGNCYTINLLDKNIFHHWLVEFVGKVENFECIPLTLHIMSVFWDGLCQKSESASSEQIFLVNKITEALLYKYYMVSRSKSMINDEQYLINDVKKNSKLKELILAKLKGFILRVFHEQSLEAFIMSNNNWDIYKNCLYEILGVDKQHETGSNKTELKKKLELIVYRNDSLKFNSVLQDNETSDTNISEAFEGSLESLFIKDKPLKLKRVDYGLTTVLDDNSPGDDWVSYVDQKLTRIDQVIQMIMWAIHPSRASHYEGCQLIAKLLLLKINSQNSFQEYNIEDTVWALIFRFAKLSSQEMNTTLVPSRLYQLLNIFIGYGLIKVPTYVRKLISSGILYLSESQDKYFHCELLVNLKIAPLMKSQYNMVLKNVKEYDPSFFENFNYDKLMEMLEVAKSNVLAGDFAFVETVPYSVKVLSSEWYLNFICTPTDNLLEPVDKENIINKLKVFCINMKEFHHFYKWVEFIVYHQLLKDISALECLVDILMFYDKLFPLLINDHILLMKTLLHLYSKELALKDPQSYQVYAFNHFWKFFTRKFPFALEIDGDLQMKLAEVYESEKLRMEKIAKSYSMASELYDQINRSTPSSGSEMNKLESHNFPSLFQKNIKLLLNSNDEGVKYSAKTSMRLLLNLNPSEYNKFMSVFLKRKDFTDEQLKHLISLKVLSFEQINKVLGEPFLLKLLDSTYFDLGLTFELQKHNYIKQNFKDLLNAYQKLRSDNNISLFNLIIIFNTSPARQDQSCNTLYKILKSNDTDCLSTITNLLGFGTKVYPCTGSLECVNNDETDDEGDHTIEELSPVELFEELDFANLWIFQVFTKYYLEILSMNAANDLVFKKHIFDIIDVTGDDLLCSKIFDRISDLTLLERLLCVVEIDFFEKCLSNRDVSLPYFRVIIEIITNLSRKLNKISGGVIAMHDRAFNLLQLCAENFASMLPDELLNSESKLDVYLKVMIVHQQFVFRKCIDGLQTGGPEKDLICHLCKLFGKVGFSLKVKLLLYDILTSLKSFTIYASTRKSHSNMAKININVPKELLDLPPFSISSFMKSDPTDDDSADIHLGIVDDSSTERQIEPKYFIFNKKTLEYDCKLVLKPFHLLINYQEAGNGPFNNTSLSMSLFNASFDKKNPT
Length1371
PositionKinase
OrganismLachancea fermentati (Zygosaccharomyces fermentati)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Saccharomycetaceae> Lachancea.
Aromaticity0.11
Grand average of hydropathy-0.182
Instability index39.58
Isoelectric point6.15
Molecular weight158961.59
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10457
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     199.55|      53|     113|     734|     787|       1
---------------------------------------------------------------------------
  734-  787 (91.12/63.31)	FYDKLFPLLINDHILLMKtLLHLY.SKELAL.K.....DPQSYQV.............YAFNHFWKFFTRKFPF
  792-  848 (42.69/23.21)	...........DGDLQMK.LAEVYeSEKLRMeK.....IAKSYSMaselydqinrstpSSGSEMNKLESHNFPS
  849-  897 (65.75/40.17)	LFQKNIKLLLNSNDEGVK.....Y.SAKTSM.RlllnlNPSEY..................NKFMSVFLKRKDF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     229.54|      60|      61|     126|     185|       2
---------------------------------------------------------------------------
   67-  120 (49.47/29.14)	.........LQE.SLPTVStlladqLSNVLHIREQDINKiSSVAL..DANSKRVKFNE...LAGPGFSL
  126-  185 (103.72/69.96)	LTDHRRELWLQEISSPHAS......LSNISKSIPHGLKR.RQVLE..QCFTKQIPISRAVWLIKCSYSI
  190-  244 (76.35/49.37)	LTSKQKHESSDEITN.HL.......YKEWTDNMAHILE..KLVFEmtQYYNE..PIQLRAWKKKISY..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.32|      29|     121|    1066|    1097|       3
---------------------------------------------------------------------------
 1066- 1097 (43.10/35.70)	YLEIlsMNAANDLVFKKHIfDIIDVTG..DDLLC
 1193- 1223 (50.22/30.08)	YLKV..MIVHQQFVFRKCI.DGLQTGGpeKDLIC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.76|      30|      40|     397|     434|       4
---------------------------------------------------------------------------
  397-  434 (43.99/46.00)	GSnktelkkkLELIVYRNDSLKFN.......SVLQDNETSDTNIS
  439-  475 (46.77/31.01)	GS........LESLFIKDKPLKLKrvdygltTVLDDNSPGDDWVS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     128.75|      41|     338|     347|     388|       5
---------------------------------------------------------------------------
  347-  388 (70.64/53.61)	KELILAKLKGFI..LRVFHE..QSLEaFIMSNNNW.DIYK.NCLYEIL
  686-  732 (58.11/38.70)	KENIINKLKVFCinMKEFHHfyKWVE.FIVYHQLLkDISAlECLVDIL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.55|      28|     121|     489|     561|       7
---------------------------------------------------------------------------
  493-  521 (45.74/95.57)	WAIHPSRASHYEgCQLIAKLLLLKINSQN
 1318- 1345 (50.81/11.02)	YFIFNKKTLEYD.CKLVLKPFHLLINYQE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10457 with Med12 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




NANANA









Molecular Recognition Features






MoRF SequenceStartStop




NANANA