<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10433

Description LANO_0F07778g1_1
SequenceMGGEADSVQSSDAKNFEVADLYERLGSDNSYKESVKRELENVQNSILPMRLRFNELLNTMAAMEQRSDGSSQETFTQVRAKLVEFVAEVQMFSTEYTRLQPLFDGLQQTSRDEKLATKFMPLERLAYLSEATLAAAGKQSNRNSPSANYTTNTTKEGNSNAGTPSSNVPTPSATNIVPSKKSRKPRPKKNSGPSPSSILPQPQQPQNQASFQAVQLQQQQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQQLQLQQQQQQQQQQQQQQQQQQQQLQQQQKQKQKQQQQQQQQQFTPATNPSQILSSMSPMNMMSSPMNLISPANGTNMPFPAASKSQGPAQRHAPSASQQFNPTSITPANILNMSISEQSNSGHPQSNTHQQQHSGQQDNMLDLNNIDLTNLNMDFLQ
Length407
PositionTail
OrganismLachancea nothofagi CBS 11611
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Saccharomycetaceae> Lachancea.
Aromaticity0.04
Grand average of hydropathy-1.214
Instability index88.94
Isoelectric point8.69
Molecular weight45890.81
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10433
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     106.40|      15|      15|     217|     231|       1
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  217-  231 (36.53/ 7.78)	QQQQQQHQQQQQQQQ
  233-  247 (35.90/ 7.52)	QQQQQQQQQQQQQQQ
  262-  276 (33.97/ 6.73)	QQQQQQQQQQQQLQQ
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.61|      16|      22|     140|     159|       2
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  151-  173 (17.73/17.26)	TNTTkEGNSnagtpsSNVPTPSA
  174-  189 (26.89/10.42)	TNIV.PSKK......SRKPRPKK
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     181.29|      34|      34|     316|     349|       4
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  280-  308 (44.60/17.14)	.QKQKQQQQQQ......QQ..QFTPA..TN.PSQILS.SMSP
  309-  338 (55.20/23.24)	MN....MMSSP......MN..LISPANGTNMPFPAASKSQGP
  339-  374 (54.13/22.62)	AQRHAPSASQQ......FNptSITPANILNMSISEQSNSGHP
  376-  405 (27.36/ 7.21)	SNTHQQQHSGQqdnmldLN..NIDLTN.LNMDF.........
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.49|      19|      41|      19|      39|       5
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   19-   39 (27.72/23.89)	ADLYERlgSDNSYKES...VKREL
   61-   82 (26.77/15.86)	AAMEQR..SDGSSQETftqVRAKL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10433 with Med3 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EATLAAAGKQSNRNSPSANYTTNTTKEGNSNAGTPSSNVPTPSATNIVPSKKSRKPRPKKNSGPSPSSILPQPQQPQNQASFQAVQLQQQQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQQLQLQQQQQQQQQQQQQQQQQQQQLQQQQKQKQKQQQQQQQQQFTPATNPSQILSSMSPMNMMSSPMNLISPANGTNMPFPAASKSQGPAQRHAPSASQQFNPTSITPANILNMSISEQSNSGHPQSNTHQQQHSGQQDNMLDLNNIDL
130
398










Molecular Recognition Features






MoRF SequenceStartStop




NANANA