<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10375
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MTEEKMPLMLENGMDEAMQVDQLDVDDLFGDGVSLSLHTARPPTKQLRQRIDELRTRGCCQGVAWSRSGAIASISPDGKTLEARFLRSHPDDGEWGLSEPTKVDLISINPSSPIIHLAWASTTNPELAVIDATGRVAILTYSITLNRPFATRKWDHDPSDDLHAIVGSYWLPLAPQSKQYYVSHGPAVKDGNQYRYESSFVHAFGPWHPNPSKSALLCVTTNGHLKMFWAQNNNKIEETSLELESVNSSDDLITHAALHSNLWVALATTNKQLRVVRVGIHWGLPQSQSDNKPPPGSQALNPTLQEKHVATSSWLPSGPSTTPVDSAATQLTHLEILPSTIGPDGQGWVPLVILTVRTYVPTPNTPYQETQSIIDKWEVINDQPQSLHPAFEQLGSRRNSTGSAPAPTSRLKKCDPVVINKAVIGLHTLQYSKVVCLAFSDGSVEYRDRFSLQEIYNERNLDRVMTLNQVGFTFQDDSPCLQMIFSPTNCSVVKVQDDGKVKWSRLHYPLGDTGNSNQDAPYAATLAALTVAASTATFNNINYDDILAVARPFANKKRFTFDWISEIVRMLKVPIDYSEDTHHDSLVRNSSLQMCLSILNHLGYRGMFQPRTFDGKFAMLALNVRNVVILITIASNTPVNIREKLSPLDEHEVVDALAGCAKWSLDLLAWLTDSLFALLDDPQFLALLAPQRFSEMTAYLQSRSDVSLHLLLCSSARGFLSAVCRRILHLEILSNRAIEFYERRAAMHNATDPSPQTKGLHVVLYKAYQKMQRVTSTSIIKVQEFDRLLTVLNNDIRSAYQSSLASLASKNPATGGQKAVDAQIKNAQNHCELNLLLASSPPPAFLGVLLKFFNTDLRAYRGLADPSKLFFSDYDLLEVDDDRRTLATRKAKSRFIDVFKRVELVGPSPTRGGGSGSGSGGKDAEDAKTPQWRRCVRCSAVMEDVFGSRPGFTFVLSQQRKCSCGGHWGLLPKGSLIS |
Length | 978 |
Position | Tail |
Organism | Colletotrichum orchidophilum |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Glomerellales> Glomerellaceae> Colletotrichum.
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Aromaticity | 0.08 |
Grand average of hydropathy | -0.261 |
Instability index | 47.35 |
Isoelectric point | 6.97 |
Molecular weight | 108347.76 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP10375
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 302.71| 98| 110| 119| 228| 1
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95- 206 (151.25/116.02) WGlSEPTKVDLISINPSSPiIHLAWA....................................STTNPELAVIdatgRVAI...LTYSITLNRPFATRKwDHDPSDDLHAIVGSYWLPLAPqskqyyvSHGPAVKDGNQYRYESSFVHAFGP
207- 343 (151.46/89.51) WH.PNPSKSALLCVTTNGH.LKMFWAqnnnkieetslelesvnssddlithaalhsnlwvalATTNKQLRVV....RVGIhwgLPQSQSDNKPPPGSQ.ALNPTLQEKHVATSSWLPSGP.......STTPVDSAATQLTHLEILPSTIGP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 229.91| 76| 158| 675| 759| 2
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675- 759 (103.57/95.95) LFALLDDPQFLALLAPQRFSEMTAYlQSRSDVSlHLLLcsSARGFLSA.VCRRILHLEILSNRAIEFYeRRAAMhnaTDPSPqTKG
836- 912 (126.34/80.56) LLASSPPPAFLGVLLKFFNTDLRAY.RGLADPS.KLFF..SDYDLLEVdDDRRTLATRKAKSRFIDVF.KRVEL...VGPSP.TRG
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