Description | Mediator of RNA polymerase II transcription subunit 13 |
Sequence | MDTSEYDTNTLLNNNISTIIYRVYEPSPEQASSFPSAAADVESELRTLGRIVYYDANRRVLWYFHVPSKDAESADNTHGVLDSNVSVAGATLLMVDEGSFEPISLFKGRAQGQQAANTPTSSSSSNSALDLSLRNPQMGNSGPPSSSDPDSKPPSAGALDSKGAGSVPIKEAYEQFITAVLSTTSASFCNRVSAIPLNHRTVLLPSKVTRDGQTERAQDTESAVVGTFRIYLTTTGALVMSLCLSCCEGLLSVNEPSSPSQLALGSQILAAPFGVLANYQGFVGGGLSYPELGLGQTPDAQFWRSADARSSQWRDTCVKILQSRGLSPALLQSCPWIALQMLRRKPGDTKMEGKLTPLPSAVATISWPAVLCFRKKSVMLARSNGLGDSVLLAQDETSDFLNDARTWFQLGGDRDDRVAKRKKEREAAAKQEASAAAPTQQPNGNSPLGLRRASNAAAAGAMYPTPPDGVQNPLGITPSMDGTTSSPGAPGITMAVVDIDTTMTDATAHDPTTMNSTQHHDSYSDAWHSNEHTNEHTNEHSNENGKNRTDAFLGGDNDNLFGDMGPDIFGDADITDADFNFFDEGGDDNLDLSGLPDLGMSDVPSMPAVLPVSMPEPAKQVIPAVEDTKPEPSPPIFAKPELKHARSTLMEEGKQRSNADRAGGLKRESSPFDPDTVYKRVRASLADVHSTPHRTPARKGSIFDSVDFDPILPLVNKKYEQGGRFDCKPTHHGLPQESNKQSPHQGPPTTDYLRRHGKGRKTLKQPEHTNALIRTITGNLENSSLITSPDKGDDLASDADDISLVSDQDDSSTSEDEPTSPFKSSIRRLNLDDDVASHVTSLRDIESVEDSDPTLALDLPKLAKAEASEILITRYFEDAESLPIHLSLPDEDTVTTAQIVTEQAVTGNLRIRDAHANTLNTAIIPETRRQLSSLGRTALQALREVIPACLGEFNTCNFRSVVEIPDVPLLGPPNRLHPRPVNPRDNAEPPKPNNLFQIPAPHMELRRAEARLSVLPASVQFWESLGLGPAQGTKDVNVVCVFPHWDGMSDVAAAFLDRMRNVYELLKLGSFERLATSSNVTDGLVPFEADKIATSPGNVSPHIVAGLGDRMEALNQGLISANASEKNFVVYFVYPPDHPGSIVEACTAFQQLFEMHRRSLTEKRQTPVNELVLQLVPLDFLTSSTGIVEPTPSDAIKLAIETYDRCTLFGGPMPSPAIMLEQSLPRGIDFKLSNASSSSLMHENTCIHIAYAQSIDERWITAAWTDNRGCQQMTASYNLGRRGKALSTSLNEVCHVIWETTHDLISKWKVHWRVIISKCGFMDAQEVGFWQGLAQTESVATVSLTLISVDTNPSMQLVPPAIKVPATTSSAFYTTPVSTPQASIVSPEQSGTPVTPMKENPTSAATPGGTPGDGNADPAEGDAILLDVTDQTWGAVLAHRLSNSSTLGELNPALISGYLVKRGGTKLEDPPVVLEVNIVHADNNPRMYEPLMREMLTYFRGLGTLARARGIVDKGTDIRPWHIAAAEKGVRALYLLM |
Length | 1537 |
Position | Kinase |
Organism | Colletotrichum orchidophilum |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Glomerellales> Glomerellaceae> Colletotrichum. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.364 |
Instability index | 45.81 |
Isoelectric point | 5.13 |
Molecular weight | 166210.36 |
Publications |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 RuleBase:RU364134 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP10370 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 55.06| 16| 18| 965| 980| 1 --------------------------------------------------------------------------- 965- 980 (33.12/16.95) PDVPLLGP.PNRLH..PRP 983- 1001 (21.94/ 8.50) PRDNAEPPkPNNLFqiPAP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 453.62| 132| 369| 766| 949| 2 --------------------------------------------------------------------------- 101- 216 (160.43/84.27) EPISLFKGRAQGQQAANTPTSS.SSSNSALDL.........SLRN.PQMGNSGPPSSSD.PD.SKPPSAGALDSK...GAGSVPIKEAY.....EQFI.TAVLSTT..SASFC..N..RVSAIPLNH.RTV..LLPskvtrdgQTER.................... 800- 949 (183.58/189.68) DDISLVSDQDDSSTSEDEPTSPfKSSIRRLNLdddvashvtSLRDiESVEDSDPTLALDLPKLAKAEASEILITRyfeDAESLPIHLSL...pDEDTVTTAQIVTE..QAVTG..NL.RIRDAHANTLNTA..IIP.......ETRRQLSSLGRTalqALREVIPAC 1220- 1319 (109.61/48.70) ................................................LEQSLPR.GIDF.KLSNASSSSLM.......HENTCIHIAYaqsiDERWITAAWTDNRgcQQMTAsyNLgRRGKALSTSLNEVchVIW.......ETTHDLISKWKV...HWRVIISKC --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 55.22| 15| 16| 745| 759| 3 --------------------------------------------------------------------------- 745- 759 (28.96/17.00) QGPPTTDYLRRHGKG 764- 778 (26.26/14.73) KQPEHTNALIRTITG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 56.85| 15| 16| 542| 556| 4 --------------------------------------------------------------------------- 542- 556 (28.88/16.53) NENGKNRTDAFLGGD 559- 573 (27.96/15.76) NLFGDMGPDIFGDAD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 195.32| 64| 374| 255| 330| 5 --------------------------------------------------------------------------- 255- 330 (100.81/82.15) EPSSPsqlalgsqILAAPfgVLANYQGFV...G.........GGLSYPELGLgqTPDAQFWRS....ADARSSQWRDTCVK..ILQSRGLSPAL 631- 712 (94.51/52.95) EPSPP........IFAKP..ELKHARSTLmeeGkqrsnadraGGLKRESSPF..DPDTVYKRVraslADVHSTPHRTPARKgsIFDSVDFDPIL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 233.13| 75| 88| 1023| 1101| 6 --------------------------------------------------------------------------- 1023- 1101 (117.60/95.84) ESL..GLGPAQGTKDvNVVCVFPH.WDGMSDVAAAfLDRMRNVYELLKLGSFERLATSSN.VTDGLVPFeaDKIATSPGNVSP 1112- 1190 (115.53/78.73) EALnqGLISANASEK.NFVVYFVYpPDHPGSIVEA.CTAFQQLFEMHRRSLTEKRQTPVNeLVLQLVPL..DFLTSSTGIVEP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 73.64| 22| 24| 427| 449| 9 --------------------------------------------------------------------------- 427- 449 (35.39/25.43) AAAKQEASAAAPTQqPNG.NSPLG 453- 475 (38.24/22.67) ASNAAAAGAMYPTP.PDGvQNPLG --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) ADITDADFNFFD 2) IIYRVY 3) LKHARSTLM 4) VYKRVR | 572 19 642 677 | 583 24 650 682 |
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