<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10365
Description |
Mediator of RNA polymerase II transcription subunit 19 |
Sequence | MSFHPRTPQSPSQFSPATSDLTSSMNSSAPSTATTLPTPAHSVNGSASQPSDMSHDIVMGDDSPHKRKRPLEDLGDREQKKAHIEDSKTGIEALHLDVGEKYLLCQTPHHERLPRITEDLFEMFNLSGIAAEVAREKPNGEKNALRKTYKGQIKKLGILGRFDSVAQDWDAPREKDGESGDKKREVYHGFRELLEIPDAEFWGTRQDPIASGLSGTVKSILNRATTMAKGPIPVKDWDSSVLGDLAPGSIDALRQGLSGKVTAPGTPSATTPNPFARKQQQGPQGAVRPQRTTKKRGYGDNSFEGYGEGFPDDGYSTGDGDDRGGQKRRKKVSDDLFMLSVTVADSLQDGNGQTFPNTMRPQGYGPSAVGA |
Length | 371 |
Position | Head |
Organism | Colletotrichum orchidophilum |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Glomerellales> Glomerellaceae> Colletotrichum.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.839 |
Instability index | 43.94 |
Isoelectric point | 6.52 |
Molecular weight | 40188.10 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364151
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
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GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP10365
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 204.18| 55| 67| 167| 225| 1
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135- 163 (28.31/10.47) ......REKpNGEK...NALRKTYK..............................GQIKklGILGRFD
167- 225 (92.86/58.86) QDWDAPREK.DGESG..DKKREVYHGFRELLEIPDAefwgTRQDPIA....SGLSGTVK..SILNRAT
235- 293 (83.00/43.50) KDWDSSVLG.DLAPGsiDALRQGLSGKVTAPGTPSA....TTPNPFArkqqQGPQGAVR..P..QRTT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 100.10| 26| 43| 300| 325| 2
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300- 325 (50.33/25.08) DNSFEGYGEGFPDDGYSTGDGDDRGG
345- 370 (49.77/24.73) DSLQDGNGQTFPNTMRPQGYGPSAVG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 39.25| 11| 43| 64| 74| 3
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64- 74 (21.64/13.53) PHKRKRP..LEDL
108- 120 (17.61/ 9.69) PHHERLPriTEDL
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