<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10317
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MATVEKAVSTETQPEIPHVEVNQIQLSVVIRNLCIYTMTEIKEFFKLEQPNQRQNMLKLVVYLRNQFLRLYVLVKWVKTIKNNNFHLLIDLLNYLRVKNMNVGQVIWNLKNIVINSTINAKLPKPDLETSLEVFTLGIPQLEQDVDVVKKLNIIKHTYGQKQNLIPNHLIIQKLEDLDVYLSVKVALADVPQSFRXGTKTIKDGKWVVEIEGEYEIILSVTNDSSPFHLVDIRFLLSSPSLDLSKHQTNKILYQQLNTILSADKSKCLYEVEELLSRKILFLRIFLCKQILVNYNQSKGQFESPLKIVYDESSITINYWASSKLVSPKQDHSIVVNIKEDFEADNKLKLAMKWNLXIPDNIKSHLNIKTEYFEDLFENIVDYITEIINNHIKLIKHTLFINGKXVFNGSEHNLTFEVPITPTKTSVLEIDVDRKTGKYQFFDTDHCLNSNNLLIAQTNSINQQHLHTNEVLSXIQSFKIKNSLIVLQNMFLKTGWCVFNDSQIMITXLDSTLKAKRSFIRMKSWPLHWYLIVSTRINSTNDIIVYVQIAKLIRENVHWQIKHLSEFLMFDNAVQVNHISMKDITYKXIFKLQNSILTKIISHSILDIFTQLKLDAKQISTSTSGLKFLPHYIHDNLKEQNIDIGSLSIFCIKAEDFMTDNKHSNIIKPVLFLVIDSSNDIRLYGSFDDSFETSSLTSCNPEDLHINFLGQKAFYMKTDEKALSDITPTENDDESSTSLMAMKHVISKYKNDLQHLIVLTSTITRLTAIFSSKNFXIIKVNVNEILFNYLPKYQKNSDSLEYDCRIXLENIDSLTELKFELSHNNPQRVLDKFLDFTGKXPINQKVLFEYYQNTSQLFSVIEQIKHFYKENGPKTNNNDFKLYVHSLTEFELGFYTINDDESYEGISIKLDLRVINRGHDVPALLYEIKTRIIDVNKNIKKSSDTSSKNSKFELINERIHKECFAANKNDQNNKFGIIEKNSKLLLQLEKYILCTPDDVYDVVSYIHNIIQN |
Length | 1011 |
Position | Tail |
Organism | Hanseniaspora uvarum (Yeast) (Kloeckera apiculata) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes>
Saccharomycetales> Saccharomycodaceae> Hanseniaspora.
|
Aromaticity | 0.09 |
Grand average of hydropathy | -0.225 |
Instability index | 34.13 |
Isoelectric point | 6.90 |
Molecular weight | 116351.57 |
Publications | PubMed=27856586
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP10317
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.99| 14| 21| 290| 304| 1
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290- 304 (21.84/18.84) ILVNYNQSkGQFESP
314- 327 (26.16/17.26) ITINYWAS.SKLVSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 199.27| 48| 500| 142| 194| 2
---------------------------------------------------------------------------
29- 85 (56.28/25.47) VIRNLCIytmteIKEFFkleqpNQRQNML..KLVVYlRNQFLRLYVLVKWVKTIKNNNF
97- 141 (64.99/33.64) .VKNMNV.....GQVIW.....NLK.NIVINSTINA.KLPKPDLETSLEVFTLGIPQ.L
147- 194 (77.99/49.07) VVKKLNI.....IKHTY.....GQKQNLIPNHLIIQ.KLEDLDVYLSVKVALADVPQSF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 96.86| 32| 159| 625| 697| 3
---------------------------------------------------------------------------
357- 400 (44.08/ 8.07) IPDNIK.........SHLNIKTEyfedlfenivDYITEiiNNHIKLIKHTLFI
632- 672 (52.78/83.53) IHDNLKeqnidigslSIFCIKAE..........DFMTD..NKHSNIIKPVLFL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 96.06| 35| 313| 410| 460| 4
---------------------------------------------------------------------------
410- 460 (42.49/60.82) EHNLTfevPITPTktsvlEIDVDRKT.........GKYQfFDTDHclnsnnlLIAQTNSI
719- 762 (53.57/31.42) EKALS...DITPT.....ENDDESSTslmamkhviSKYK.NDLQH.......LIVLTSTI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.59| 16| 314| 547| 566| 6
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518- 542 (18.28/ 9.98) FIRMKswpLHWylivstRINSTNDI
551- 566 (29.30/14.22) LIREN...VHW......QIKHLSEF
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