<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10316
Description |
RNA polymerase II holoenzyme cyclin-like subunit |
Sequence | MSANYWTSSQYNNNLYTKPELNDIRLSLFTKELQKYGNYWLTIPLQFKDQESGSNKQISIYAKELHYDRDYNLRIYLYLQLMKLGKKFQLKQVIISSAMIYLQRFLLKCSIKECNVYYLITTCLYLASKVEECPIHIKSLNLIAKSYWPDFIHSDCTKITEFEFYLIEELESYMIVYHPYDSLKKILQSFTEYVKENLEKENLDNIEDYLLNYEYLQDTWAIINDSYVTDSHLLFHPHVIAITSLLLSIVLKGEQLDQKIEKTTKIIKDIENKKNVEKSNNKAPINNKTVSSDVGSTNNSVNNTTNMHSSETKEFIIPNEEYDEMLMNLGLSGDNNIQNKTLTKDPMSPNINSNSETTELEEGNFQYQGLKEELKQNLIEKELIHKKTAKLNEFVAFSLINMQDIEDCFKEIMILYQFWTGFSVVGQSTKFDKLQKNKYNEEWIRFLLYRVYQTKA |
Length | 456 |
Position | Kinase |
Organism | Hanseniaspora uvarum (Yeast) (Kloeckera apiculata) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes>
Saccharomycetales> Saccharomycodaceae> Hanseniaspora.
|
Aromaticity | 0.12 |
Grand average of hydropathy | -0.484 |
Instability index | 48.22 |
Isoelectric point | 5.56 |
Molecular weight | 53781.72 |
Publications | PubMed=27856586
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | cyclin-dependent protein serine/threonine kinase regulator activity GO:0016538 IEA:InterPro
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GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP10316
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 105.48| 31| 33| 26| 58| 1
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27- 57 (56.07/34.39) SLFTKELQKYGNYWLTIPLQFKDQESGSN...KQ
59- 92 (49.41/29.15) SIYAKELHYDRDYNLRIYLYLQLMKLGKKfqlKQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 39.92| 11| 21| 107| 117| 2
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107- 117 (20.38/12.62) LKCSIKECNVY
126- 136 (19.53/11.82) LASKVEECPIH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 106.07| 24| 25| 142| 165| 3
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142- 165 (46.31/23.17) LIA..KSYWPDFIHSDCTK..ITEF.EFY
166- 193 (31.92/14.24) LIEelESYMIVYHPYDSLKkiLQSF.TEY
378- 398 (27.85/11.72) LIE..K....ELIHKKTAK..LNEFvAFS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 78.31| 23| 50| 285| 307| 4
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285- 307 (40.90/24.06) INNKTVSSDVGSTN.NSVNNTTNM
337- 360 (37.41/21.48) IQNKTLTKDPMSPNiNSNSETTEL
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