<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10315
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPYNENLVSWSKNGIILYAKGSAVALTFFESINGTNWRLHPEKYYNLGTYENNKLNNSHAFKDSEQKRSQNQSPVSNPPKTSKLNFNISRIEFSNWGSLSGDLVAVADEIGTLSILMVGVDAGGVSTLDHMAMLFQDSMIKNSSIKDTQNHSAIKNLELLDGPEKVQSNHFTNLYSTAILDLQWVCSTKQFMTSRLNAGWKNPNPGSGPAVSKLSFNSLPSFGVYHPQFIKYSCACIRRNGEFSLWYQFSNSKETKKQTLRVAENEWLDNAELAHCKENNVFYLTTYSNLDNLVSVYRISINWNSQQQQQQKQQDPQQQQQQSLEDPTLNCEKIFEMTPSRMHGDEIINLVKCSLLSRSYDANSDADLLLIYEIAGKRTSIVKRYSIQKTAPTALFTNILLKDSTHLVNTASFYQPKFVEDISIDDIVESVQYQYIQNVVHFRLASGKSKMFRKGSWKEFVYNEQIVSDQVSPLEAGFSFPVLPTNLEWCTLSPLACGLLYKIQGDPLLHYTPYLSDKLTITENKIISLAYNFVSCTHKSCMGEDATIAIQTYLMALNNTEKREQIIMAIVQTCFNFFGFLPNSAKEVVERIIITKPMQKLMLLQLELSGVFENSSRVYLMSRSIMCFRDILFAFNTVVRNAQMMIQHSATMSAQNNGGKLYQFSFSKQDLFFSLLPISKWFVKYVTFLMQQLLFVMNNSSDENNLFALSVISGKVTRVLLLAILQEINKIKKLVTKFPETAYPALNDSSIFLLKVFEDSPVSFEKFETFLVDINNKIKKNDDALLEAPANSTTAHELSSREAYILMKGTIPRKFSYFKDIVLSETFNKVIPEIDAANLFFTDTSNLKLFADEFYNKKYFQLLQPINEGLIVENEKIRMESSASFSNMDFDDVTKEPLYFNNNPADGNQNAAKDKYKRCVRCGNITMAGYVIPKSKTVVATSISTRRWCSVYSKTCTCSGMLHEI |
Length | 965 |
Position | Tail |
Organism | Hanseniaspora osmophila |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes>
Saccharomycetales> Saccharomycodaceae> Hanseniaspora.
|
Aromaticity | 0.11 |
Grand average of hydropathy | -0.238 |
Instability index | 39.89 |
Isoelectric point | 7.94 |
Molecular weight | 109765.20 |
Publications | PubMed=27856586
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP10315
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 196.94| 62| 187| 613| 678| 2
---------------------------------------------------------------------------
613- 678 (104.39/75.53) ENSSR.VYLM.....SRSIMCFRDILFA..FNTVVRNaqmmIQHSATMSAQNNGGKLYQFSFSKQDLFFSLLPI
797- 866 (92.55/57.69) ELSSReAYILmkgtiPRKFSYFKDIVLSetFNKVIPE....IDAANLFFTDTSNLKLFADEFYNKKYFQLLQPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 240.20| 79| 127| 1| 87| 3
---------------------------------------------------------------------------
1- 87 (115.07/95.61) MPYNENLVswsKNGIILYAKGSAvALTFFESINGTNwRLHPEKYYNLgtYENNKLN.....NSHAFKDSEQKRS.QNQSPVSnPPKTSKLNFN
133- 217 (125.14/75.01) MLFQDSMI...KNSSIKDTQNHS.AIKNLELLDGPE.KVQSNHFTNL..YSTAILDlqwvcSTKQFMTSRLNAGwKNPNPGS.GPAVSKLSFN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 104.13| 32| 188| 313| 353| 4
---------------------------------------------------------------------------
313- 353 (51.01/51.67) QQDPQQQQQQSLEDP.TLNCEKIFEMTpsrmhgdeiINLVKC
504- 536 (53.12/33.40) QGDPLLHYTPYLSDKlTITENKIISLA.........YNFVSC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 124.76| 42| 46| 687| 732| 5
---------------------------------------------------------------------------
687- 732 (62.01/53.11) TFLMQQLLFVMNNSSdennLFALSVI.SGKVTRVLLLAILQEI.NKIK
736- 779 (62.74/43.03) TKFPETAYPALNDSS....IFLLKVFeDSPVSFEKFETFLVDInNKIK
---------------------------------------------------------------------------
|