<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10260

Description Uncharacterized protein
SequenceMHNQHVIGQQQELQQLSQNPQSYLQATNQPLRVASNDFFTIDPYRKRKDQSRISVLQKYEILGYIAAGTYGKVYKAKGKSVNNLNNLYAIKKFKTDSKDNEVIHYTGISQSAIREMSLCKELNHQNITQLTEIVLERKCIYMVFEFGEHDLLQIIHFHSHPDFKPIPELTLKSAIYQILQGLSYLHQNWVLHRDLKPANIMVTNDGVIKIGDLGLARKFNNPLQSLYSGDKVVVTIWYRAPELLLGARHYTPAIDLWAVGCILAELLSLRPLFKGEETKMDNKKQVPFQENQLLKILEILGTPTLDKWPSLNNYPEYSQLSKITQFPSNLKAWYQSNGGTNKNCLKLLFDLLEYDPAKRLNALDSLDHKWFTENPKPVDNIFANSKFKYPQRKIQKDDNDILGNVNNPMFGNHHGYNVGNNANKRAYAGMGVYDEQGRKRVR
Length442
PositionKinase
Organism[Candida] arabinofermentans NRRL YB-2248
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Pichiaceae> Ogataea> Ogataea/Candida clade.
Aromaticity0.10
Grand average of hydropathy-0.540
Instability index42.25
Isoelectric point9.22
Molecular weight50908.62
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10260
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.19|      22|     101|     237|     258|       2
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  237-  258 (43.42/29.82)	WYRAP........ELLLGARHYTPAIDLWA
  333-  362 (33.77/21.66)	WYQSNggtnknclKLLFDLLEYDPAKRLNA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     168.15|      50|     178|     182|     232|       4
---------------------------------------------------------------------------
  182-  232 (82.87/53.47)	LSYLHQNWvLHRDLKPANIMVTNDGV......IKIGDLGLARKFNNPLQSLYSGDKV
  363-  418 (85.28/51.09)	LDSLDHKW.FTENPKPVDNIFANSKFkypqrkIQKDDNDILGNVNNPMFGNHHGYNV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10260 with CDK8 domain of Kingdom Fungi
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