<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10210

Description Serine/threonine-protein kinase SSN3
SequenceMYNNQTQRNTTQVQREFLQRLQQQNRASGLLNNSHNTVMNNNSNNPTPKKTTPSTYGSRPGLMANSSVFTLLPYKTRKDAVRRSVLQKYSVLGYIASGTYGRVYKAECRQDKKSLYAIKKFKADKEGEIVSYTGISQSASREMALCRELNHTNITKLAEIILENKCIYMVFEYADHDLLQIIHYHTHPDTKSIPDQVVKSIMWQVLNGVSYLHQNWILHRDLKPANIMVTSQGVVKIGDLGLARKFNNPLQTLYNGDKVVVTIWYRAPELLLGGRHYTSAIDLWAVGCIFAELLALRPMFKGEEAKMDNKKNVPFQRNQMQKIVEILGTPTVNQWQSLPKYPEYTALQEFKQFPSNLQAWYQSIGATNKRGLELLASLLVYDPAQRMTAFDALIHPYFLDPPRVLENIFEGQNFKYPSRRIHADDSDITSSQTNTAKRAAFSDDTFHQRKKIK
Length453
PositionKinase
OrganismCyberlindnera jadinii (strain ATCC 18201 / CBS 1600 / CCRC 20928 / JCM 3617 / NBRC 0987 / NRRL Y-1542) (Torula yeast) (Candida utilis)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Phaffomycetaceae> Cyberlindnera.
Aromaticity0.10
Grand average of hydropathy-0.517
Instability index40.45
Isoelectric point9.56
Molecular weight51964.80
Publications
PubMed=27535936

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10210
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.73|      22|      35|     178|     199|       1
---------------------------------------------------------------------------
  178-  199 (40.52/24.25)	LLQ..IIHYHTHPDTKSIPDQ.VVK
  212-  236 (29.22/15.90)	LHQnwILHRDLKPANIMVTSQgVVK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.98|      21|      31|      29|      58|       2
---------------------------------------------------------------------------
    3-   34 (25.38/27.98)	NNQTQRNTTQVqreflqrlQQQNrasGLLNNS
   44-   66 (34.60/15.08)	NNPTPKKTTPS........TYGS.rpGLMANS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10210 with CDK8 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MYNNQTQRNTTQVQREFLQRLQQQNRASGLLNNSHNTVMNNNSNNPTPKKTTPSTYGSR
1
59










Molecular Recognition Features






MoRF SequenceStartStop




1) TFHQRKKIK
445
453