<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10196
Description |
Mediator of RNA polymerase II transcription subunit 14 (Fragment) |
Sequence | KSPPPIPHISNNIIPLSNILKFYTQEAYKQLLTIIENLSSTVESESDSNRKKKFLTAIISLRQDFIKIYTLVKWAQNSKDVSKLIDLLNFLRSQDFYFEQLGFGLNELNRYLGAQLPNSDLLSSLEILIKGRPQLPSYNLIKPLKISTEKTLEVLQDLNLILTTRMALIDDLPKRFMNNYTIKDGRVIFTIPNEFEVAITVANDLIIDKIEDYYQSPFFFISFKFLFGINPDTSLITHKDNKIATKLPQKSHENLERIINQVLLKQGLNGLYDTLHKYSISFKLYLIARQLKELSTNSKWKNSIQFKYQSSLIIINYWSSHYLSRNWKSFIELGIDKNYNLNFRWFKNGRYSTAHLNKDSEKDSTGILSESIPGFNSNDDEEDLSVDLILNIIINKHSESSISNIYSKLLELLPEDSCSILSPHQLLLNLTPTKKTIFAINPLTGFFYFMDPSPIQNYITKRINSQPSIIKNKNFITEDDMMNNVVSNLIQLKLETLNKEINNKLITTEWISNNIIHLNDLETLKLFEFDINEKEQSNNKIQFYRCKNWPSSWFLINLIAGLTSKTYWWVARIKSIKGEWKIQWVEKLKVNDDLSYEFFDDLSITCSNKIIDHMITEELQIRSSRFLKVEKNAIDVFKLPLDKNIDTNTIYESIIMIHNHGEFLPLSNSSNSLFLLVKLTNTNNVTQMNLRLMGHIKNLPLNDNSNDDFSKLSLLFKKDMFEIVDLIDLTSRMNDSEHDNSNNKLLLDNLFNNLNKLNQLIKLLEQLNKTNIEIIQNQINEISIKINPIYSTFKLVLPEQENGSITILTDKDELNEVKIMVKFLNQNSIEKKNTMIGSIKYLQELVPILKALRAIQTHLIINNSMKLSNGLQKLQFDTRLENLNTIQFVYTINSINPSNPKKVAKDRISLCLNFKMNKFAKKEKLLIRLSMKDNLNSRNLKFKKLFESIFKSINEFDASLSSVNNTNGSTNGSANGKTSTTTLMKFNYDYLLDSILLEDMMMRIADCFLNY |
Length | 1011 |
Position | Tail |
Organism | Hyphopichia burtonii NRRL Y-1933 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes>
Saccharomycetales> Debaryomycetaceae> Hyphopichia.
|
Aromaticity | 0.09 |
Grand average of hydropathy | -0.283 |
Instability index | 34.57 |
Isoelectric point | 8.73 |
Molecular weight | 117291.81 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP10196
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
5| 201.07| 39| 114| 750| 788| 1
---------------------------------------------------------------------------
455- 485 (33.33/14.42) IQNYITKrINS..............QPSIIknKNFITEDDMMNNV
486- 510 (31.73/13.34) VSN........LIQLkL..ETLNK..........EINNKLITTEW
750- 788 (63.34/34.69) LFNNLNK.LNQLIKL.L..EQLNKTNIEII..QNQINEISIKINP
791- 823 (21.08/ 6.15) ..........STFKL.VlpEQEN.GSITILtdKDELNEVKIMVKF
867- 900 (51.59/26.75) LSNGLQK.L.QFDTR.L..ENLN..TIQFV..YT.INSINPS.NP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 138.20| 34| 34| 646| 679| 2
---------------------------------------------------------------------------
646- 679 (58.40/29.20) DTNTIYESIIMIH.....NHGEFLPLSNSSNSLFLLVKL
681- 714 (53.90/26.40) NTNNVTQMNLRLM.....GHIKNLPLNDNSNDDFSKLSL
719- 747 (25.90/ 8.97) D...MFEIVDLIDltsrmNDSEH...DNSNNKLLL....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 128.98| 43| 269| 102| 178| 3
---------------------------------------------------------------------------
129- 176 (59.81/66.04) IKGRPQLpsyNLIKPLKISTEKTLEVLQDLNLILTTRmaLIDDL........PKRF
576- 626 (69.17/25.35) IKGEWKI...QWVEKLKVNDDLSYEFFDDLSITCSNK..IIDHMiteelqirSSRF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 74.79| 21| 76| 313| 333| 6
---------------------------------------------------------------------------
313- 333 (40.17/24.46) IIINYWSSHYLSRNWKSFIEL
392- 412 (34.62/19.97) IIINKHSESSISNIYSKLLEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 35.75| 10| 22| 912| 921| 10
---------------------------------------------------------------------------
912- 921 (18.37/ 9.74) LNFKMNKFAK
935- 944 (17.38/ 8.79) LNSRNLKFKK
---------------------------------------------------------------------------
|