<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10170
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MDIVQPNGTSDVLKPANGSALCSGSAPALPAVTTNMLPLATLLQNFAEYAFSEISYLVATLPNLQQPDSIKKKKLLELFVRLRKDLVKLYVLVKWSARARDFQRLIQLMSFMRTEQGNLFNSVWGMKSIVPGLASAKLPNPDLMTALEVFINGRPQLPSHNLIRQSALSAKTILKTFRNLNVLLAIKLALADDLPPRFRNYQIRDGRVTFTVDREFVASVSIADDETQDETISPFFLIDFRFLFGFPDDRYVLDDALVTPLPAPSHVKLESLANAVLHRSGLPGLYTILHHYATTYKLYLVHKQLANMRQSGVWKGHLQHTYNIDQSTIVVTYWAARAALRSFLEIGLNRKFELSFRWSKDGEYVSTHSLTEGLTDTDFGLNIEQTLTEITNKHAELALRGIYQQMSAQLAVRDGPALIRMLSPGKLHYQLTHTQHTVVSIDSITGNVFLVNPTPLMVSFVTRINKDAAAVAKVAYNLIVMRLEILTLKISSVLSAVGWIRNDVVKVSSGSEDWAKLQFSASSALNVQFFRRREWPQGWFLICGVNGYSSNLHWRVAQLRAALGAWQIQWLAKINLLAETDVLCEPKNYKSYFDYETLAELAVVAANKITSHLVLEELKAQGCRLMSLRTPTLAADPAVHNLLRADKSESVIVIDKDSLTAVPGCYSTLFLKIKLAGRFLCLSLYGKLRARINLKIDGPLAIKFEPETGVFEIQTQVETLSMGSAASGTLLAETLGKLTTLLNLISILNVLQQSRVEILLTDLDSIRFRYDSEEATLCGLVGAGIRLELAPNNPHNLVAVQLDSILATHGIPTLIKALGGTLPLVKALREISTANQEALRDAASGEFLLPKIRFSLFTRELNHFQLQYAAYLAESSAAVMDPHDIHSGTATLRALEVIDLTVRLRRGYRGRTYLFVTSPAPFLREFWSFKTNPFQEGDEPMDVHPLETGVACAVSCASRVLGVLNREILARGGVP |
Length | 975 |
Position | Tail |
Organism | Babjeviella inositovora NRRL Y-12698 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes>
Saccharomycetales> Debaryomycetaceae> Babjeviella.
|
Aromaticity | 0.08 |
Grand average of hydropathy | 0.083 |
Instability index | 36.03 |
Isoelectric point | 8.90 |
Molecular weight | 108364.11 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP10170
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 68.05| 23| 318| 476| 498| 1
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476- 498 (37.36/31.68) YNLIVMRLE.IL.TLKISSVLSAVG
795- 819 (30.68/24.40) HNLVAVQLDsILaTHGIPTLIKALG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 216.80| 77| 489| 138| 233| 3
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138- 233 (101.81/90.15) LPNPDLmtalevfiNGRPQLpsHNLIR...........QSALSAktILKTFRNLnvLLAIKLA...LADDLPPRFR...NYQIrDGRVTFtvdrEFVASVSIADDETQDETIS
628- 721 (114.99/59.94) LRTPTL........AADPAV..HNLLRadksesvividKDSLTA..VPGCYSTL..FLKIKLAgrfLCLSLYGKLRariNLKI.DGPLAI....KFEPETGVFEIQTQVETLS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 182.41| 58| 64| 845| 907| 4
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845- 907 (85.05/68.14) GEFLLPKIRFSLFTRELNHFQlqyAAYLAESSAAvMDPHDIHSGTA.....TLRALEVIDLTVrLRRG
910- 972 (97.36/60.47) GRTYLFVTSPAPFLREFWSFK...TNPFQEGDEP.MDVHPLETGVAcavscASRVLGVLNREI.LARG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 98.26| 31| 194| 49| 90| 5
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59- 90 (46.10/27.40) ATLPNLQQPDSIKKKKLLELFVRlRKDLVKLY
256- 286 (52.16/42.38) ALVTPLPAPSHVKLESLANAVLH.RSGLPGLY
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