<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10161

Description Uncharacterized protein
SequenceMYYGKTATVFSTPKDELTAKKYLLTRPADVVYPLDHEAGYPPRETPGKTHTYPDFAPWHHSSHEDELAVTNLHKGYSEPAATQNEFLLARGAMSTVLCGAADAAVARLSAAMLQTIQHHEAFNKIPAASHSFKLPPRVTLTDQKREAWLANLANAAYPLRQLSRTIPHGLKKNKMLQQCVEKRIPCCRAVWFVKCISGNEIRLLARKATRADAWWALETEWVREWTHNILDHVHKLAHDLREPDHKPDRVKGELAYVMRLVGTLFMERMLDRAEFLSGILELMAAPGLAPDEPRLECVLVGLQFVSFLWKEYLAWADTAPASATSLTVSLVRVYVRVQQYHNTLRFRPGPAAKQLARAPLLANLIHALQQKLCLLFRSRSGDNFIFPDEWPSFQWLVAKDNWLVGNADDARHWDVISYRNECLCGNIMSGEARAADTCETATAVLVARLDRLLAGDLPLNAVDELHELVMDSADWAHNIQTVVHWSCSGFRHHPLTPLVGSRILASFHSHEPDYGLRLEIERAVLDAVYSIPDHLPESAVQSCSLHRLVKELFQCRLFNIGSYVRKLISSGLLYDPAEGPLLFHVSVFINLPITHHPASLNQVNMILRKLGHAPMDDARQLLELNLLAQQIATSVIEPGAGAERWECHVPTLAMQNHLCQCVLSELRVRIAQSERLIHVTPAKVTMLYRFFTANGCLEAFFDDFVVKVLLKNEDKVLIYYLDSLYLIAELVQHHQLFLMWSSLCNPANDPAGNRRYSKLRRAREIGTGLPTAAAELPERAKYYCLFALTDLLMDSFLDLKDDGFFLRFSRFWQASLRMLNTCAPLWNLDEVARAAFCTKLEKVMVEENNSELNLHGLLVIARELLAPHDDFFTQTPLTPSESNVLLVTQANFNALMNGFISEPDEANFLRLFHHYCTNFPAEFAACMKTYLSVNYAKLLGDTGLVYRVFVKFLTHQVVELVDLVLMVHEVDPAVKKSMMVTETFNGIDSTHFYPVLYEILFTDSQTLDNSPVFQTILSKDQQLRLEILVGAYRTEHPQEFVSLLAHGLLDENTDGLQRTASHSTLTDLDAGLFDAPRSPIAPPSFGIAQTMFYSEPFANSYRVCLLATVAELAITDIGLLIDKLFTQPLIFAHYTLFVDVLNALTMPRGDANYEGLVNSTGTLAKIPLFINEFNLPFYQLLIRLILDVEASSDPSVGVRTVIQNILEVTYTRSTVVLGESIRYLSEPFQSSLLQECEAMLLKSQALILQMLEPVGGEEHASATRVTHVLAGIISKSSQLVKSEVLFSGELLKDLHRLLEMLIEASEAREANSENTAREAISDNIMNGEIANEGIAKEVTSESIVNEKIINKTTVNEAIEDEVPAVFSEAGRRLVPNESAKPASETQYVLSFFCKILLINYQQIVHLLMEDPGTLFFDDLIRLLQLKVLEEDTKIKILLYDILLLMRSSVKMLIKPDTDGGFVQKLFDLPKLSAYNPLRSGLEAVRDNLKTGNDVRDRQLCVLESKTGKYHPFYFKNSELLEDSNPVSLMNDTTINMAMFDTAIERRNPT
Length1549
PositionKinase
OrganismBabjeviella inositovora NRRL Y-12698
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Debaryomycetaceae> Babjeviella.
Aromaticity0.09
Grand average of hydropathy-0.025
Instability index38.51
Isoelectric point5.71
Molecular weight174510.77
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10161
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     272.35|      88|     102|     492|     584|       1
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  492-  584 (138.95/105.25)	HHPLTPLVGSRILASFhSHEPDYGLR..LEIERAVLDAVYSIPDhlPESAVQ..SCSLHRLV..KELFQCRLFNIGsyVRKLISSGLLY.DPAEGPLLFH
  595-  689 (133.40/84.33)	HHPASLNQVNMILRKL.GHAPMDDARqlLELNLLAQQIATSVIE..PGAGAErwECHVPTLAmqNHLCQCVLSELR..VRIAQSERLIHvTPAKVTMLYR
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     187.07|      42|     284|     990|    1031|       2
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  990- 1031 (69.10/50.81)	THFYPVLYEILFTDSQTLDNSPVFQTI..LSKDQQLRLEIL..VGA
 1211- 1255 (52.40/36.42)	TRSTVVLGESIRYLSEPFQSSLLQECEamLLKSQALILQMLepVG.
 1263- 1304 (65.57/47.77)	TRVTHVLAGIISKSSQLVKSEVLFSGE..LLKDLHRLLEML..IEA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.23|      31|      45|    1395|    1425|       4
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 1395- 1425 (52.30/34.99)	ILLINYQQIVHLLMEDPGTLFFDDLIRLLQL
 1441- 1471 (51.93/34.69)	ILLLMRSSVKMLIKPDTDGGFVQKLFDLPKL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     267.37|      81|     320|      19|     107|       5
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   19-  107 (124.39/98.18)	AKKYLLTRP..ADVVYPLDHEAGYPPRETPGKTHTYPDfaPWhhSSHEDELAVTNLHKGYSEPaATQNEFLLARgamSTVLCGAADAAVAR
  351-  433 (142.98/86.97)	AAKQLARAPllANLIHALQQKLCLLFRSRSGDNFIFPD..EW..PSFQWLVAKDNWLVGNADD.ARHWDVISYR...NECLCGNIMSGEAR
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      72.11|      18|     249|     224|     241|       6
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  224-  241 (34.66/24.91)	EWTHNILDHVHKLAHDLR
  474-  491 (37.44/27.57)	DWAHNIQTVVHWSCSGFR
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      72.08|      25|      46|    1117|    1147|       7
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 1117- 1147 (31.22/34.61)	IGLLIDKlFTQPLifahYTLFV....DVlNALTMP
 1166- 1194 (40.86/22.90)	IPLFINE.FNLPF....YQLLIrlilDV.EASSDP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10161 with Med12 domain of Kingdom Fungi
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