<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10153

Description Uncharacterized protein
SequenceMSGSSIKLGNNTTNGNSHNSDYSLRSNPASHNNQKNNNHNNMSSANVPPARSGPAGSISRFNLLTSNPTGGHRTTTVNSRALGGSSNPRDELMVHRYIMNDPGMGVLPMCKPTNNDISIYPDFAPWHKTSIEDEIAFNHLQKGYSEPPHVFNETASARTSIYPMLKGKSNISALSYFMIQSMNTRDKKNRILSNSTFKPPPRVTLTDQKREAWLRDLATPSVSLRRLSRTIPHGLRNRVLLEQCCNKAIPITRAVWLVRCVGANELRALKRKGHNSGPSASSSSIASSSSTVGVAATSESSWLHDWTEQVTDFIYKITNDCIIASNSNLTNSPSICWTKMEYILGLSVHLFSENLLDIRLFLQWCLKFLEESSLDQIPLSLLFIRIFWNEFYSQNYSKQLAEILLHQYCKLSQPAITHHSAITPIKVRISQYTQHLFILSPDSFVIPTQWVTLGNYFNEALDLHNMAPDLAIHDLAKSIRFRNEALMVHDVPVIRASRNKTRALINKLNDISAPRSLDLATISVNLLESTRLNVAAVFKTVFEWAVLYNSIGMERVFICVGLVRCWNEQRRGVSEAFHTFVDSLDIALPENNDNTNSENYFTIKTLEYLYELIAQLLNIRVFSLSLYFRRLIASGLLFIPRLKHKAQLHILILSNLPIKGYFPEFTNQQRMLLNSVPSFDHDQDLKLEQAKNLIKAKLPSLFNSHKSDTSKIHAGIGMETAMAVDMNPDVDVRPEESVFNINNRNSPRNGFPILKAEETKLLSSLFKGTKITLSQWLLDIYTKRLNASGESAGTIFLSVSEFAILQAIFENLQCLMAFYLSLKSTLTSKQSMQSFLLYYIAQTVRHYFQLFATFDDVSELIESMFNKFKLLDGHLENKPKTKKPIPLGVRKLLHFAFQNICEIKPKLGQEIVNLLHQPTQLNPATNLSAFISSRAIVTLADLLGDNYPISHGNGFVPSLSPMSEVNTNNVPNDINYAQIDQIPFTDIFDHVTNKFLTCCKDRNETNTARQLVALLQELRDFNEECFDDLIAKWLRDHVEPILYFDLASFSRVILFLIIYECILITKVADIFLQLRNIRLPGSTVSNQFILSLMSDNDSYVEFLTLKPWESSLLMYLRTIFSFGNSNYYGNDGAKIYLRYILQEILDSSTQVPQAQQTQQTQQDQPQLLVSYHMVEFLARLTTVNFDLFLENLIKPILDSENYQSINAFHQILLRILQLPASISLSPKTDILNLTKSLNDFTLPVFQFDLRLLFILYKIERESQNQLHGEDGFPTLDIDIMIDQGPGQPVTAPTPVFLNSVTHPNEEDRLESRNTNLGRSTVKSEPDVSAAANKLDAKQNNEIEVGFANKVFECIWELSTSELVSANFRRLFADLLVYLPQKLKGEILVGAEIRFLHSSNFPRVLFNEDPGLDLSSTTTNTAIETTKTVSPSSSNIVPLLLELVDAVADSSTFDIFTVRPFAITTALEKLIFIAENTVFKENTGSWQYCEPDTMSNHGINTNGSISFKSDHNGGINTGGLLTIDEANETNEVYHNNDAEIIDASKEQPDQVKDNGEDEEKVKPSFSSIIKDDIHDGLMLFAKIIMIHRSSFTVKADQPISLRDQIINGLEILLELPFVDAFAELYGLLSDTLNAIKAEISDNSYNNMAMNNGHQHTMRNGTSNSQTTDIGDVSSVSPQFLTHARARTLSSSSLSSSTRAQVKHTINGASNSSSGTDGFRCQSDHDSYLADLMVFNKASGTFADLNVRSFDLLEESNPTISINDVAINLALFGCTIDKRNPN
Length1780
PositionKinase
OrganismNadsonia fulvescens var. elongata DSM 6958
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Saccharomycetales incertae sedis> Nadsonia.
Aromaticity0.09
Grand average of hydropathy-0.196
Instability index41.95
Isoelectric point5.95
Molecular weight200076.87
Publications
PubMed=27535936

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10153
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     121.00|      39|     519|     404|     443|       2
---------------------------------------------------------------------------
  404-  443 (67.38/49.87)	LLHQYCKLSqPA......ITHHSAITPIKVRISQYT...QHLFI..LSPDS
  914-  963 (53.62/34.15)	LLHQPTQLN.PAtnlsafISSRAIVTLADLLGDNYPishGNGFVpsLSPMS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.74|      18|     685|     985|    1002|       3
---------------------------------------------------------------------------
  985- 1002 (36.12/19.92)	TDIFD..HVTNKFLTCCKDR
 1666- 1685 (28.63/14.38)	TDIGDvsSVSPQFLTHARAR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.51|      24|     685|      16|      71|       4
---------------------------------------------------------------------------
   43-   66 (41.05/69.31)	SSANVPPARSGPAGSISRFNLLTS
 1147- 1170 (41.46/ 6.86)	SSTQVPQAQQTQQTQQDQPQLLVS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     124.34|      40|     685|    1036|    1084|       7
---------------------------------------------------------------------------
  525-  564 (63.54/41.41)	NLLESTRLNVAAVFKTVFEWAVLYNSIGMERV...FICVGLVR
 1036- 1078 (60.80/63.03)	DHVEPILYFDLASFSRVILFLIIYECILITKVadiFLQLRNIR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     299.27|     100|     599|     694|     802|      11
---------------------------------------------------------------------------
  694-  802 (153.60/145.06)	IKAKLPSLFNS..HKSDTSKI...HAGIGMETamaVDMNPDVDVRPEEsvFNINNRNSPRNGFP......ILKAEETKLLSSLFKgtkiTLSQWLLDIYTKRLNASGESAGTI.FLSVSEF
 1289- 1400 (145.67/112.32)	VTAPTPVFLNSvtHPNEEDRLesrNTNLGRST...VKSEPDVSAAANK..LDAKQNNEIEVGFAnkvfecIWELSTSELVSANFR....RLFADLLVYLPQKLKGEILVGAEIrFLHSSNF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.82|      16|      21|      67|      83|      14
---------------------------------------------------------------------------
   67-   83 (25.11/20.48)	NPTGG...HRtTTVNSRALG
   87-  105 (27.72/17.33)	NPRDElmvHR.YIMNDPGMG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      29.89|       8|      24|     355|     364|      15
---------------------------------------------------------------------------
  355-  364 (12.36/13.96)	LLDIRLFlqW
  381-  388 (17.53/10.69)	LLFIRIF..W
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10153 with Med12 domain of Kingdom Fungi
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