<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10146
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MSQNTFKRGSCASRIAWSKTGPIAYITDKGVQICSLYCSDGEKWELSKPFTLTQVPIVHGGVPIVHLSFSPGNTSLACIDSRGQLSIWMVSVASSDVTCVYSPPSEALTSTNEMELNSIIGFSWLDPSKTIVLADRTTIQPNPEHTEGLRNRSISTYSITTANVLGPRHPLPNKYAAVAFTRRGVLKLFSQNTSGNKFYENSKALCPGENAVFLIASFGEWRDESFLLAGTVIGTGEVRLWSVSIDWNTNPPANQPHENIPTNPGNLVAKRVTSESFGAPSPIYELTHIHCMSSRQSDTCDMEIWMIWSGSDNTSIIKRYDLLKSETDLHESFYSLNLQNGAADQSISVSRDNERSFSLKEERIIEDKTVLNITSHLYDTFVNVCYSDGTIETTYREQEPTGNIKGILTLQEVGFAHSPGEIGSEICLSPSLLSFVSLNNEGSLSFHHIKYTASYDANSLYSVAVAFALRHAVACFSSILCDDIFILFQEFIKELETSAPHYKDEFVWVLLEEAHKSINYNLDIPVDHPVEKVMMNTSLQRLFSLQASVFTKKNFYYPIAGRIAMCYLNLRLLTFALTFTLRAASQVRPNIPDNELKAGHIHANTGFARWCTDFLVFICKELFEASQTPNCSLYDENNESLPMTIILSKPSRMFLIFSLRGIRGLEQIALRASQNEEATPGASMAARTAYRRFKDVISNTPVPLAPIEKLLNDVDNALKNIYPNLPDRRKLEYQLVFEGKIPHEFSPIAKRICDAWTKNIKPEVNIPKLYFHDVSWLGLDDSGFASLAKKSTNYFFLPEEESGKIKTDFLRKFIINHDSKLRSCTRCKGLSVYDDAKALSLSYWSVANQRSCLCGGSWIADASKHNAK |
Length | 868 |
Position | Tail |
Organism | Nadsonia fulvescens var. elongata DSM 6958 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes>
Saccharomycetales> Saccharomycetales incertae sedis> Nadsonia.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.192 |
Instability index | 48.04 |
Isoelectric point | 6.29 |
Molecular weight | 97128.24 |
Publications | PubMed=27535936
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP10146
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 94.12| 30| 38| 702| 739| 1
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702- 736 (43.69/39.64) VP..LAPIEKLLndVDNALKNIYP..NLPdrrKLEYQLV
741- 774 (50.42/23.39) IPheFSPIAKRI..CDAWTKNIKPevNIP...KLYFHDV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 90.30| 26| 218| 74| 100| 2
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74- 100 (43.15/36.85) TSLACIDSRG....QLSIWMVsVASSDVTCV
287- 316 (47.15/34.99) THIHCMSSRQsdtcDMEIWMI.WSGSDNTSI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 79.04| 26| 37| 614| 642| 4
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614- 642 (39.93/36.66) FLVFICKELFEASQTpncSLY.DENNESLP
654- 680 (39.11/25.19) FLIFSLRGIRGLEQI...ALRaSQNEEATP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 159.89| 53| 346| 14| 73| 5
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14- 73 (79.55/68.70) RIAWSKT..GPIAYITDKGVQICslYcSDGekwELSKPFTlTQVPI..VHGGVPIVHLSF..SPGN
363- 421 (80.34/46.81) RIIEDKTvlNITSHLYDTFVNVC..Y.SDG...TIETTYR.EQEPTgnIKGILTLQEVGFahSPGE
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