Description | Mediator of RNA polymerase II transcription subunit 13 |
Sequence | MDFPGGNITNVHVIDGFSSIHWRIYTEEPGITNHPSEAPTNGHTILKHLSRLKDLELRLRNLGCLVSCYPRRLGLWIFSPNSNFDSLAPLSQSNDGLSRLQVGSLTLKVSASGSVSSRELVRTLSAEPQAPNVNTAGSQRSQNVPNPPRRIEGYGTSAAIYASFISAVTGAISLQLIRRHGAIPLGSRTLFTAVEKDGYETRIANDSPIAIPSLSTLHIQLTSGGKLTVALQTIAQHGMSRLQSPKNDPDEPRDAQPGLDIWLSPSGTVARLVSFSASTQDSISPNASGSNGTLGLAAAKRTQWKQSVLEWLGNFGLPVDSHEENLWIEVEVWEPFYSRLAGEIFRQSEEGPTALPLKRILWPARYCFRRTKSIALDASYGKEDSCHLADSPLGLAEEWHGTGNFVHEEANSIAPSGGFQNQPMRDPEISPSKAEFPEPMESLSRIAQYPDLQATSLVYPTPPDGATAISSDVFADQPDLPLPQSQLGDQQKPKQASFKEQSDPDIPIGFGPSAGLTVGSGLYDTNGDDDLFGEMNDRDFGTRGITDADFSFFDDPDFEDMGGASATDHIQSSPNIAETNLEEDNEQPSPDVPLPDIHVPTTVEETNAPQTDVAEQEAEIPSTKQETPKAHMSSPREENSQPISPPLSPVEVKKILFSGPDDGDQSTIKREKKQSHFTPVSFKQNIGDWNQKYGAEGRFWFSAPGTSTAMEPVNPPSDIPTIGLPRRSGKAAVKFDNAAKVTDEQDILSGGAKGSLHSTSDSSSVSSEDDDSDEVMSERERSPVNLTRKRKRAQSNTSGSVAQALEHPLIENPQLVSANKAENSTFLGNLLSTFSDWSLLGYFSVSQNQHPPTISQKEEQIQVAQLLVDQITQSSLDHVFDGKVGLSGLDNEMYPLRNILEDTVFTDEVDRLDLKGYASLQHGSPSLPTSDGLTPRQVPQRKDAAKGVISKLLPPHLRIRRGKDYLEALPPAVSFWETFDLEPAHGPKDISAYCIHPRATADAADAFLERLGLLYSACNLGNHVRGDMCFESGLGSWNMELSGSSNYRSTMQSLRDLCKELGDALSGSQSRTENFVVYVINPFTHAAALADICAAFWQLFQKYIMGTDKQQVGKLNELVLQIIPISFVMSPESIVVPSQSDYLSLALEVYSRCPPKDSESNLVHCAPPVLLTEPGPKAINFKLVPERLSPLQDGKSLHIACSRSLDQRWITVAWSDNTGALQRMMSYCLRYRNSGAARGISDVRNEIWGATQTIMDRIQARWKIIIVNTEPVDQDELDTWTNLAEQHNKSKSIPLELMILHVNATTDFSLEPPSLLIPTSVFNAQASSTPVATPGPSAASPDQYGNATTPTSGGNAPMSAATPDVQPESELDFFLTDIRDESWGVILSHRLNSSPHLTEYRPALASGYLLRRKGPTDGDGVFATNVNLIYAQRPTSSHGALLKEVLGMYHDLAILARARGTRCVQRNTLPWHIATAVRAQELLSYVF |
Length | 1487 |
Position | Kinase |
Organism | Aspergillus cristatus |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.414 |
Instability index | 54.03 |
Isoelectric point | 5.11 |
Molecular weight | 162373.46 |
Publications | PubMed=27267057 |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 RuleBase:RU364134 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP10070 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 190.39| 48| 51| 489| 539| 1 --------------------------------------------------------------------------- 431- 481 (65.50/35.63) ....PSKAEFPEPMESLS.RIAQYP..DLQATS..LVYPTPPDGataissDVFADQPDLP 489- 539 (83.00/55.61) DqqkPKQASFKEQSDPDI.PIGFGPSAGLTVGS..GLYDTNGDD......DLFGEMNDRD 547- 584 (41.89/20.26) D......ADFSFFDDPDFeDMG.GASATDHIQSspNIAETNLEE......D......... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 139.12| 44| 406| 183| 321| 2 --------------------------------------------------------------------------- 238- 289 (69.58/102.72) GMSRLQSPKNDP.DEPRDAQPgldiwlSPSGTVArlVSFSAST.....QDSISPNASG 705- 754 (69.54/11.02) GTSTAMEPVNPPsDIPTIGLP......RRSGKAA..VKFDNAAkvtdeQDILSGGAKG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 128.36| 37| 407| 987| 1023| 4 --------------------------------------------------------------------------- 987- 1023 (64.72/43.29) PKDISAYCIHPRATADAADAFLERLGLLYSACNLGNH 1402- 1438 (63.65/42.44) PALASGYLLRRKGPTDGDGVFATNVNLIYAQRPTSSH --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 95.66| 30| 407| 183| 213| 5 --------------------------------------------------------------------------- 183- 213 (47.31/34.08) IPLGSRTLFTAVEK.DGYETRIAnDSPIAIPS 592- 622 (48.35/29.93) VPLPDIHVPTTVEEtNAPQTDVA.EQEAEIPS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 131.84| 47| 48| 36| 83| 9 --------------------------------------------------------------------------- 29- 79 (70.54/42.24) PGiTNhpSEAP.TNGHTILKHLsRLKDLELRLRNLGCLVS.CYPRRLGLWIFS 80- 130 (61.29/32.39) PN.SNfdSLAPlSQSNDGLSRL.QVGSLTLKVSASGSVSSrELVRTLSAEPQA --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) GEMNDRDFGTRGITDADFSFFDDPDFE 2) IGDWNQKYGAEGRFWFS 3) PPLSPVEVKKILFSG 4) TIKREKK 5) VSFKQ | 533 686 645 667 680 | 559 702 659 673 684 |
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