Description | Mediator of RNA polymerase II transcription subunit 19 |
Sequence | MTSNLPRTPETPTQTTPSSAEFPNKFVTSPIDTYSMPTPARSVNGSMSSNPTEMSFETGFHEDSSLKRKREVDDQGEQEQKKKVHVEEPESLHSLTINDLHLDVGEKYYLCKTPHPAQGIRHDSGIVRAPLREDLFERYDLYPIAKTVARTNPDGTKGVKLRKTYKNHIKDHGLVGTFDAVKKENGAPGTLYELMWNVKYQDEAWIANWTTGKEIEKGIPESLLPAGNKVFAMAKGPIPKDKFNPSILGEGGNPTVPVDTAKAVQNGSRTPIPQNLAAARIAKAEAPRPKRTTNKRTYGESSYEGYGEGFVDDDTQDAGYSTGDGDAGKQRKRPKKNSQGHGFQSGPMRQASYGPGMVGA |
Length | 360 |
Position | Head |
Organism | Rhynchosporium commune |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Leotiomycetes> Helotiales> Helotiales incertae sedis> Rhynchosporium. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.901 |
Instability index | 36.78 |
Isoelectric point | 8.62 |
Molecular weight | 39535.65 |
Publications |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364151 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP10067 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 247.10| 75| 261| 4| 80| 1 --------------------------------------------------------------------------- 4- 80 (124.40/67.77) NLPRTPeTPTQTTP...SSAEFPNKFVTSPIDTYSMPTPARSVNGSMSSNPTEMSFETGfHEDSSLKRKR.EVDDQGEQEQ 266- 344 (122.70/59.95) NGSRTP.IPQNLAAariAKAEAPRPKRTTNKRTYGESSYEGYGEGFVDDDTQDAGYSTG.DGDAGKQRKRpKKNSQGHGFQ --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) FPNKFVTSPIDTYSMP 2) KQRKRPKKNSQGHGFQ | 22 329 | 37 344 |
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