<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10043

Description Protein kinase protein with adenine nucleotide alpha hydrolase-like domain
SequenceMFSSPFSVTSSHSSEHEPVARDSSIIVAVDRDKNSQQAAKWAVDKLLTRGSMLQLVHVRVEANKDEGDAEITQLFISYRGYCARKGMHLKELILDGTDISKAIIDYATSNAITDIVVGASTKNTFIRRFRNPDVPTCLMKMAPDYCTVHVIHKAKAIQVKAAKAPAPFATLPPKQHSQPNIESDASRASRGDWKKTPPTSSPLASRNSVDRLSAYAKAPSRDRPLTGARTAPQKDFDDYIDFIAPPRPSVARSSFSDDIDFAMSMELPSIDFGESMELSSAMSMESLSCAGDVEAEMRRLRLELKQTMEMYNSACKEAVDAKQKAAQMHQMKVEESKKYQELRNSEEEALALVEMEKAKCRAALEAAEAAQKIAELEAQKRLRAEWKAKREAEDRKKATDALNKNDIRYRRYSIDDIEAATHKFDKALKIGEGGYGPVYKAVLDHTNVAIKILRPDASQGRKQFQQEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMDYGSLEDRLCRRGKTLPIPWSIRFRIAADIATGLLFLHQAKPEPLVHRDLKPANILLDHNFVSKISDVGLARLVPQSAADVTQYRMTSTAGTFCYIDPEYQQTGMLTTKSDVYSLGIMLLQIITARSPMGLTHHVENAIERGAFQEILDPTVTDWPVEEALEFAKLALRCAELRKKDRPDLGKEILPELNRLRNLGHEYETSQVSCASTNCSSSAPYSFNNDDI
Length721
PositionTail
OrganismZea mays (Maize)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
Aromaticity0.07
Grand average of hydropathy-0.433
Instability index49.09
Isoelectric point6.65
Molecular weight80581.98
Publications
PubMed=19965430

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
hydrolase activity	GO:0016787	IEA:UniProtKB-KW
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10043
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.04|      15|      18|     255|     271|       1
---------------------------------------------------------------------------
  236-  250 (28.11/12.72)	FDDYIDF.IAPPRPSV
  255-  270 (24.93/19.94)	FSDDIDFaMSMELPSI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      94.99|      19|      20|     354|     372|       2
---------------------------------------------------------------------------
  284-  301 (21.07/ 8.02)	.MESLS.CAGDVEAE.MRRLR
  309-  324 (24.77/10.43)	EMYNSA.CK...EAV.DAKQK
  354-  372 (30.81/14.38)	EMEKAK.CRAALEAA.EAAQK
  375-  395 (18.34/ 6.24)	ELEAQKrLRAEWKAKrEAEDR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.03|      21|      21|     183|     203|       3
---------------------------------------------------------------------------
  183-  203 (37.15/19.54)	SDASRASRGDWKKTPPTSSPL
  205-  225 (32.88/16.52)	SRNSVDRLSAYAKAPSRDRPL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10043 with Med32 domain of Kingdom Viridiplantae
Unable to open file!