<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10016
Description |
Polymerase II transcription-mediator2 |
Sequence | MKTEASPAAGDIEEPLVHFKWRYMVRLIQWHLTEELLVPSVLIEWLSNQLQERDSVDVLELLLPIMLGLVDTITLSQTYVRMFVELLVRRLNDASVVDSPKGPSVSSVIAELLRYMVLAVPDTFISLDCFPLPSFVVPDVYGRGALLKITSSGGISSSKRCDAYRYLSCGYAVCSIQKRAYDLATVANPNLQARGAAKVVQALDIALVTGNLSVAYSSLFNDLSDTLMEERWIKEVSPSLQSSLMWIGTVELSLICSIFFLCEWATCDYRDCRASPSRNVKFTGRRDLSQIHMAVSILKNKMDEMNNLSRSKSSTRVTLNNITKGSSLTDACLTAAAVDDTSGLQSNAKNVDEKKDTNDIFESPGPLHDIIVCWLDQHEVSSVAGFTRVDVLIVELIRNGIFFPQAYVRQLIISGITDKNDTMLDVERKRRHHRTLKQLPGSSLFDILEETRTVEEQQLYEMMSTYSSERRLVLSELSCDHSFYASGRGEYTASSCIRKQSDLPLASGGDKHGRVPEQVEDVKALLSSLLGFTYPSPVESEPRQIKTSFQESATSTLSQVETGEAKSGCEVCMRSKGQKLDDTATPFQGFSLIQSDEEDIWWVRKGTKLQESFNIEPVQKSVKQTSRGRAKVVRKTQSLAQLAAARIEGSQGTSTSHVCESKMSCPHHKPNIDGDNVKDFDHTRVANLTEIGKSLKRLRLLERRSVSSWLLKTVRQLIEGNETTAAKATNSISILSLQSDDKTTSKWRLGDEELLSVLYLLDTCCDLVSCARFLVWLLAKIRGGMGSSGQPGRSSMHTRNRDHQVCQVSEALVFSSLLRYENILLAADILPDVLSALVNRNSVSAIVRHPGSTAFAYVRYFLKKYRDVAGVAKWEKSFRTTCDQRLLAELDNGRSIDGELISSSGVSAGEEIDEQVRQKLNGRSSRLVQNMKEIVQRQADEIQRSLKEKKVLATPRNPPTFEKEDSYQIAHDIVSGLVECIRQNGGANPDGDLSTVASAVSAIVANAGHVIAKHLDFAGGNYQGVNSVSNSLNFVRHTLRVHINSLCLLKETLGDRFSRAFEIALAVETSGAVTAAFASPKMHRNQFQPSPEAHDAYGNHTSDLSNSGKGFVGRTAKVSAAVSALVVGAVVHGAVSLERMVAALKIKDGLDILQLLRGLKSSSNGVSRPTGTFRIEHSTDVLVHWFRVLLGNCRTVYDGLIADILGDSYILALSRLQQMLPLSVIFPPAYSIFAMVLWRRYIFNREDPQLYQSLSNAISDITRHQPFREICFRNTHRLYNLLASDVGDSEFAAMLETHSPDRNSKILPFIPLRARLFLDALIDCNTPTIQGDGASEPCDPKDNELKLSERLMQLLDTLQPAKFHWQWVEMRLLLDEQALMEKVAAGKTALESLRSLSPKAEGFTLSDSEKGFTEVILSRLLARPDAAPLYSEAVRLLGKLQESLVMDVKWILQGQDAILGRRSTRQQLVHIAQRKGLSTKAQVWKPWGWSSLLSDVIPNKTAKRKLEVTSIEEGEVVDDTVDAKRPSKTPPHSVDRSFEAIRSINKYLTEKALAELVLPCIDRNGDYQ |
Length | 1568 |
Position | Kinase |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.203 |
Instability index | 48.01 |
Isoelectric point | 7.18 |
Molecular weight | 174200.79 |
Publications | PubMed=19965430
|
Function
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP10016
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 64.88| 18| 143| 128| 159| 1
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128- 145 (34.57/46.33) DCFPLPSFVVPDVYGRGA
179- 196 (30.31/10.65) RAYDLATVANPNLQARGA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 132.50| 41| 222| 217| 260| 2
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217- 260 (64.82/52.66) SSLFNDLSDT.LMEERWIKEVSpSLQSSLMWIGTVELSliCSIFF
442- 483 (67.68/43.49) SSLFDILEETrTVEEQQLYEMM.STYSSERRLVLSELS..CDHSF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 278.06| 92| 702| 267| 369| 3
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267- 369 (145.77/101.18) CDYRDCRASPSRnvkftgrrDLSQIHMAVS.ILKN.......KMDEM...........NNLSRSKSSTRVTLNNI.....TKGSSLTDACLTAAAVDDTSGLqsnAKNVDEKKDTNDIFESPGPLHD
980- 1095 (132.29/73.15) CIRQNGGANPDG........DLSTVASAVSaIVANaghviakHLDFAggnyqgvnsvsNSLNFVRHTLRVHINSLcllkeTLGDRFSRAFEIALAVETSGAV...TAAFASPKMHRNQFQPSPEAHD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 346.61| 110| 656| 665| 777| 4
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665- 777 (174.15/148.89) CphHKPNIDGDNVKDFDHTRVANLTEIGKSLKRLRLLERRSVsSWLLKTVRQLIEGNETTAAKATNSISILSLQSDDKTTSKWRLGDEE......LLSVLYLLDTCCDLVS.CARFLVWL
1324- 1440 (172.46/134.18) C..NTPTIQGDGASEPCDPKDNELKLSERLMQLLDTLQPAKF.HWQWVEMRLLLDEQALMEKVAAGKTALESLRSLSPKAEGFTLSDSEkgftevILSRLLARPDAAPLYSeAVRLLGKL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 76.48| 22| 27| 1238| 1260| 5
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1238- 1260 (36.42/29.60) WRRYIFnREDPQLYQSLSNAISD
1267- 1288 (40.06/27.24) FREICF.RNTHRLYNLLASDVGD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 67.35| 16| 49| 60| 75| 7
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35- 50 (18.62/ 7.78) ELLVPSVL..IEW.LSnqL
60- 75 (26.08/13.76) ELLLPIMLGLVDT.IT..L
111- 127 (22.65/11.01) ELLRYMVLAVPDTfIS..L
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 76.17| 27| 28| 577| 604| 8
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584- 612 (39.19/31.99) ATPFQGfSLIQSDEEDIWWVRkGTKLQES
615- 642 (36.98/24.17) IEPVQK.SVKQTSRGRAKVVRkTQSLAQL
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