<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09974

Description Serine threonine kinase
SequenceMGRSYLEGGRDAGADLGYPLVAVCIDKDKNSQNALKWAIDSLVQKGQTIVLVHVNTKGTSGGVEDAAGFKQPTDPHMKDLFVPFRCFCTRKDINCKDVVLDEHDVAKSIIEFSAQAAVEKLVLGATTRGGFVRFKADIPTTISKGAPDFCSVYIVNKGKVSSQRNSTRAAPRVSPLRSQIQSSQIAATLKPEPPQSHRWSSSSRGHEHGETPRVDNFRSPFARGGPANTRKNRGGSGMSHEARYRRYSIEEIEQATDNFNDARKVGEGGYGPVYKGFLDHTQVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMASGSLDDCLFRRSGGAGGPVIPWQHRFRICAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDVYSFGVMLLQIITAKPPMGLSHHVGRALERGELQDMLDPAVPDWPLEEAQCLAEMALRCCELRRKDRPDLGAVVLPELNRLRALGEDNMQYCGAIIRGGGGGGGMHSSSPFHSNISRSHAEMMIDSQYPRSVFSSRAGDSPMPPRRSNA
Length596
PositionTail
OrganismZea mays (Maize)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
Aromaticity0.07
Grand average of hydropathy-0.378
Instability index48.19
Isoelectric point8.70
Molecular weight65317.56
Publications
PubMed=19965430

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09974
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     205.61|      54|     178|     145|     198|       1
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  145-  198 (96.61/62.55)	GA.PDF.CSVY.IVNKGKVSS...QRNSTRA.APRVSPLRSQIQ.SSQIAATL......KPE..PPQSHR
  201-  240 (41.44/22.33)	...................SS...SRGHEHGeTPRVDNFRSPFA.RGGPANTR......KNRggSGMSH.
  319-  383 (67.56/41.37)	GAcPEYgCLVYeYMASGSLDDclfRRSGGAG.GP.VIPWQHRFRiCAEIATGLlflhqtKPE...PLVHR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     269.45|      75|     419|      53|     130|       2
---------------------------------------------------------------------------
   15-   50 (35.89/19.10)	............................DL.GYPLVAVC..IDKD.KNSQNALKWAID...SLVQ.KGQTIV............
   53-  130 (125.68/97.63)	HVNTKGTSGGVEDAAGFKQPTDP..HMKDL.FVPFRCFC..TRKD.INCKDVVLDEHDVAKSIIEFSAQAAVeklVLGATTRGG
  470-  546 (107.88/76.22)	HVGRALERGELQDMLDPAVPDWPleEAQCLaEMALRC.CelRRKDrPDLGAVVLPELNRLRALGEDNMQ......YCGAIIRGG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09974 with Med32 domain of Kingdom Viridiplantae
Unable to open file!