<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09939

Description Protein kinase protein with adenine nucleotide alpha hydrolase-like domain
SequenceMQGGPLSPDEYRVASPPALLHQPAPVIVVAIDRDRNSQLAAKWVVDHLLSGASQIVLLHVAAHYPANHGFAMAETTQSALEAEMKEIFVPYRGFFNRNGVDVFEVVLEEADVSKAILGYITANKIQSIALGGASRNAFTKKFKNADVPSTLMKCAPDYCNIYVVAKGKSVNVRLAKCGVPPMHGGADSPSDTDSVRESGLYIRRGSRGHGHLPPVMPDARRSMDGRSTLPELTTRPPFRERSLPSSATKNVVVLPGKDYSEAPSRSARHDSFGGDLDFGPSTRFSSMDFGDNLDLTASPAREPMSPATGAQRRRNAEVRARREADEKVRALDAISNHDFRYRKYHIDEIEMATERFSDELKIGEGGYGPVYRASLDHTPVAIKVLRPDAHQGRKQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMEHGSLEDRLFRRGGTPPIPWAQRFRIAAEIATALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYRLTATAGTFCYIDPEYQQTGKLGVKSDIYSLGVLLLQVVTARPPMGLTHHVEKAIDAGTFAQMLDITVKDWPVEEALGYAKLALKCTEMRRRDRPDLATVVLPELNRLRNLGHAYEARMSAVGTNSGSGESNDQVSGSSPTAGGSWRTAES
Length665
PositionTail
OrganismZea mays (Maize)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
Aromaticity0.07
Grand average of hydropathy-0.344
Instability index49.01
Isoelectric point8.02
Molecular weight73032.10
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
hydrolase activity	GO:0016787	IEA:UniProtKB-KW
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09939
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     262.62|      88|     321|     131|     237|       1
---------------------------------------------------------------------------
   10-   52 (46.62/16.35)	EYRVASPPALLHQPAP....VIVVAIDRDRNSQLaAKWVVDHLLSGA...........................................................
  141-  237 (140.24/123.40)	KFKNADVPSTLMKCAPdycnIYVVAKGKSVNVRL.AKCGVPPMHGGAdsPSDTDSVRESGL........YIRRGSRGHGHLpPVMPDArRSMdGRSTLPELTTRPP
  496-  558 (75.76/38.03)	..............................DVGL.ARL.VP........PSVADSVTQYRLtatagtfcYIDPEYQQTGKL.GVKSDI.YSL.GVLLLQVVTARPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.30|      15|      16|     263|     278|       3
---------------------------------------------------------------------------
  263-  278 (25.94/22.26)	PS.RSARHDsFGGDLDF
  280-  295 (25.37/15.99)	PStRFSSMD.FGDNLDL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09939 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DFGDNLDLTASPAREPMSPATGAQRRRNAEVRARREADEK
2) GVPPMHGGADSPSDTDSVRESGLYIRRGSRGHGHLPPVMPDARRSMDGRSTLPELTTRPPFRERSLPSSA
3) MSAVGTNSGSGESNDQVSGSSPTAGGSWRTAES
288
178
633
327
247
665










Molecular Recognition Features






MoRF SequenceStartStop




1) SWRTAES
659
665