<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09934

Description Protein kinase protein with adenine nucleotide alpha hydrolase-like domain
SequenceMQGGPLSPDEYRVASPPALLHQPAPVIVVAIDRDRNSQLAAKWVVDHLLSGASQIVLLHVAAHYPANHGFAMAETTQSALEAEMKEIFVPYRGFFNRNGVDVFEVVLEEADVSKAILGYITANKIQSIALGGASRNAFTKKFKNADVPSTLMKCAPDYCNIYVVAKGKSVNVRLAKCGVPPMHGGADSPSDTDSVRESGLYIRRGSRGHGHLPPVMPDARRSMDGRSTLPELTTRPPFRERSLPSSATKNVVVLPGKDYSEAPSRSARHDSFGGDLDFGPSTRFSSMDFGDNLDLTASPAREPMSPATGAQRDIEVEMRRLRLELKQTMDMYNAACKEAINAKQRAKEMQLMKLEVRARREADEKVRALDAISNHDFRYRKYHIDEIEMATERFSDELKIGEGGYGPVYRASLDHTPVAIKVLRPDAHQGRKQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMEHGSLEDRLFRRGGTPPIPWAQRFRIAAEIATALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYRLTATAGTFCYIDPEYQQTGKLGVKSDIYSLGVLLLQVVTARPPMGLTHHVEKAIDAGTFAQMLDITVKDWPVEEALGYAKLALKCTEMRRRDRPDLATVVLPELNRLRNLGHAYEARMSAVGTNSGSGESNDQVSGSSPTAGGSWRTAES
Length703
PositionTail
OrganismZea mays (Maize)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
Aromaticity0.07
Grand average of hydropathy-0.351
Instability index47.99
Isoelectric point7.98
Molecular weight77558.51
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
hydrolase activity	GO:0016787	IEA:UniProtKB-KW
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP09934
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     140.98|      42|     136|      10|      52|       1
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   10-   52 (69.84/59.00)	EYRVASPPALLHQPAP....VIVVAIDRDRNSQLaAKWVVDHLLSGA
  141-  186 (71.14/54.91)	KFKNADVPSTLMKCAPdycnIYVVAKGKSVNVRL.AKCGVPPMHGGA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     391.39|     125|     136|     402|     536|       2
---------------------------------------------------------------------------
  400-  534 (205.84/154.70)	IGEGGYGP......VYRASLDHTPVAIKVLRPDAHQ.GRKQFQQEVEVLScirhpnmVLLL...GACPEYGCL..VYEYMEHGSLEDRLFRRGGTPPIPWAQRFriaAEIATALLFLHQTKPEPLVHRDLKPANIL..LDRNYVSKISD
  535-  673 (185.54/118.45)	VGLARLVPpsvadsVTQYRLTATAGTFCYIDPEYQQtGKLGVKSDIYSLG.......VLLLqvvTARPPMGLThhVEKAIDAGTFAQMLDITVKDWPVEEALGY...AKLALKCTEMRRRDRPDLATVVLPELNRLrnLGHAYEARMSA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      75.18|      16|      16|     263|     278|       3
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  263-  278 (30.03/15.64)	PS.RSARHDSFGGDLDF
  280-  295 (23.61/10.87)	PStRFSSMD.FGDNLDL
  299-  313 (21.54/ 9.33)	PA.REPMSPATGAQRD.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.97|      29|      30|     335|     364|       4
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  335-  364 (43.43/37.90)	ACkEAI.NAKQRAKEMQLMKLEVRARREADE
  368-  397 (46.54/35.25)	AL.DAIsNHDFRYRKYHIDEIEMATERFSDE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP09934 with Med32 domain of Kingdom Viridiplantae
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