Description | Mediator of RNA polymerase II transcription subunit 15a |
Sequence | MDGAANWRPTQGADPATVAAVGGVDPNAAAPTGSDWRTQLQPEARQRIVNKIMETLKKHLPVSVPEGLTELHKIAVRFEEKIYTAATSQSDYLRKISLKMLSMESQKKTQQNPGNAQVIPNQNPPGPGSNPAQSSAIPLMSQQQTRQPNASTSVQGSLPSVGQNLSSVSQTLTLQNLSGMPQNTMNNGLAQGTPQDMYAAQRQMAGRQQQQQQQQAHNQFMYQQQKLLMNQKLQQNSRMQPHIQQQQTLLQSTQMQSSQQPMVQMSSGLQPGQIAIPQTQSMAMQSATQSGIQQNALNSVQQPVQSLLQQPTPSVVRQQQHPQSMHQQSSLQQTQPTQQPNIPLQQQPQQLMGHQSNL |
Length | 358 |
Position | Tail |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea. |
Aromaticity | 0.02 |
Grand average of hydropathy | -0.848 |
Instability index | 76.31 |
Isoelectric point | 10.04 |
Molecular weight | 39388.77 |
Publications |
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell |
GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro transcription coactivator activity GO:0003713 IEA:InterPro |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP09881 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 96.75| 24| 25| 175| 198| 1 --------------------------------------------------------------------------- 187- 210 (35.32/ 9.78) NGLAQGTPQDMYAAQRQMAGRQQQ 211- 230 (32.58/ 8.36) QQQQQAHNQFMY....QQQKLLMN 231- 247 (28.85/ 6.42) QKLQQ..NS..RMQPH.IQQQ..Q --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 125.42| 25| 26| 305| 329| 2 --------------------------------------------------------------------------- 111- 146 (27.03/ 6.82) QNP..GNAqVIPNQNPPGPGSNpaqssaiplmS..QQQTR 270- 293 (32.17/ 9.94) QPG..QIA.IPQT...QSMAMQ..........SatQSGIQ 310- 333 (38.75/13.94) QPT..PSV.VRQQQHPQSMHQQ..........SslQ...Q 335- 356 (27.47/ 7.09) QPTqqPNI.PLQQQPQQLMGHQ..........S....... --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) KISLKML 2) MDGAANWR | 95 1 | 101 8 |
© 2021 Shailesh Lab
Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab