<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09873
Description |
Mediator of RNA polymerase II transcription subunit 15a |
Sequence | MGTALQQGSTGPMQGALNAQHQSNSNMISNNAMSTMQTNTNAMQANVNSLQQLKQHQEHQMMQNQQMKQRQQMLQQMQQKKILQQQLPIQQLQKQQQQGPIQVQQLHSGNDVNELKVRQGAAIKSGMYQPLNQRNYYQQIKRGDVFPISSPQNLQASSPQISHYSHVDQHSLLQSQVKTGTPLHSANSPFVPSPSPPVAPSPVPLDSDKPLSNLSSLTSAGQAGHQQTSLAPLTQSIAVNTPGISASPLLAEFTSADGGQVSVPTQVPTKSSAAERPLDRLLKALRTTQPESLSAAVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFITHDGSGASKRMKRDTGAMPLNVSSAGSLNDSLKQSYTVGTPELQSTATSRVKCQRAEVNHVLLEEIQEINKQLIDTELHVSEDDAESFTTSDMAEGTVIKCTFTAVAVSPSLKSMFASAQMSPILPLRLLVPGSYPKCSPVLLDKFPDEQCRNSDDLSTKAKSKFSVLLRGLAEPMSLREIARTWDACARKVIAEYAQQTGGGSFSSSYGCWESCVGAS |
Length | 560 |
Position | Tail |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
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Aromaticity | 0.04 |
Grand average of hydropathy | -0.454 |
Instability index | 56.33 |
Isoelectric point | 8.67 |
Molecular weight | 60330.37 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | |
GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro
transcription coactivator activity GO:0003713 IEA:InterPro
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GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP09873
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 65.16| 14| 15| 30| 43| 1
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14- 27 (19.71/ 9.72) QGALNAQHQSNSNM
30- 43 (22.32/12.20) NNAMSTMQTNTNAM
64- 77 (23.13/12.97) NQQMKQRQQMLQQM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 77.17| 20| 20| 78| 97| 2
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78- 97 (34.19/18.29) QQ.........KKILQQ.....QLPIQQLQKQQQ
104- 131 (20.90/ 8.39) QQlhsgndvneLKV.RQ.....GAAIKSGMYQPL
132- 155 (22.08/ 9.27) NQ.........RNYYQQikrgdVFPISSPQNLQ.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 175.88| 57| 70| 185| 243| 3
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185- 243 (95.80/56.91) SANSPFVPSPSP.PVAPSPV..PLdsDKPLSNLSSL..TSAGQAGHQQTSLAPLTQSIAVNTPG
255- 316 (80.08/42.05) SADGGQVSVPTQvPTKSSAAerPL..DRLLKALRTTqpESLSAAVSDIGSVVSMIDRIAGSAPG
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