<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09843
Description |
Polymerase II transcription-mediator1 |
Sequence | MQRYAGFSGSRDGARLEASPFSSSSSSGYPVSSRRQQQLTPYKLKCDKDPLNNKLGPPDFYPQTLNCPEETLTKDYVQYGYKETVEGIEEAREIVISQIPYFCKPDVVIKCKEALKKRLRAINESRAQKRKAGQVYGVPLSGSLLIKPGVYPEQRPCNEDTRRKWVEALAQPNKRLRSLSEHVPHGYRRKSLFEGLIRYNVPLLRATWFIKVTYLNQLQARPAPNSTSVVASDNQRSNQWTKDVVEYLQQILDEVCSKEGAIVPPSFKEQSSPGLAAGTNQIKMKTESSPAGDSEEPLVHFKWRYMVRLIQWHLTEELLVPSVLIEWLSNQLQERDSDDVLELLLPIILGLVDTITLSQTYVRMFVELLVRRLNVDRPKRFSVSSVIAELLRYMVLAVPDTFVSLDCFPFPSFVVPDVYGRGALLKITSGGGILCSKRRDAYRYLSCGYAVSSIQKRAHDLAAVANPSLQARGAAKVVQALDKALVTGNLSVAYFSLFNDLSDALMEERWIKEVNPCLQSSLMWIGTVELSLICSIFFLCEWATCDYRDCRASPSQNVKFTGRRDLSQIHMAVSILKNKMDEMNNLSRPKSSTRITLNKVAKGSLNDACLTAAAVDDSSGLRSNAKNVDEKKDTNDIFESPGPLHDIIVCWLDQHEVSNVAGFTRVDVLIAELIRNGIFFPQVYVRQLIISGITDKNDTMLDVERKRRHHRTLKQLPGSSLFDVLEETRTAEEQQLYEMMSTYSSERRLVLSELSCGHSFYASGRGEYTSSSCIRKQSDLPVASEGDKHGRVLEQVEDVKALLSSLLGFTYPPLVESKLCEIKTSFQESVTSTLTQVETGEAKSGCEDCMRSKGQKLDDSATPFQGFPLIQSGEEDIWWVKKGTKLQESFNVEPVQKSVKQTSRGRAKVVRKTQSLAQLAAARIEGSQGASTSHVCESKMSCPHHEPNNDGDNVKDFDHTRAANVTAIGKSLKRLRLLERRSVSSWLLKSIRQLVDGNGMTASKATNSISILPLQPDDKTASKWRLGDEELLSVLYVLDTCCDSVSGVKFLIWLLVKIRGVGSSGQPGRTYMLMRNRDHQVCQVNEALVFSSLLRYENILLATDILPDVLSALVNRNSMSATTRHPGSTAFAYVRYFLKKYRDVASVAKWEKNFRTTCDQRLLAELDNGRSIDGDLVSSSGILAGEEIDEQVRQKLNGRSSRLVQNMKEIVQRQADGIQRSLKEKKVLAGAAPRNPLTFEKEDSYQIAHDIVLGLVECIRQNGGANPDGDLSIVASAVSAIVVNAGHMIAKHLDFAGGNYQGVNSVATSLNFVRHTLLIHINSLCLLKETLGDRFSRAFEIALAVETSAAVTAAFAPPKMHRNQFQPSPEAHDAYGNHTSELSNSGKGFVGRTAKVSAAISALVVGAVVHGAVSLERMVATLKIKDGLDIMQLLRGLKSNTNGVSHPTGGFRIENSTEVSVHWFRILLGNCRTVYDGLIADILGDPYIIALSRLQRMLPLTVIFPPAYSIFAMVLWRRYIFNCEDPQLYQSFSNAINDITRHQPFREIYFRNTHRLYNLLASDVGDSKFAAMLESHSPDRNSKILPFIPLRARLFLDAIIDCNTPTIQGDGASEPCDPKDNELKLSERLMQLLDTLQPAKFHWQWVEMRLLLDEQALMEKVAAGKTTLESLRSLSPKAEGFALSDSEKGFTEVILSRLLARPDAAPLYSELVHLLGKLQESLVMDVKWILQGQDAILGRRSTRQQLVHIAQRKGLSTKAQVWKPWGWSSLLSDAIPNKTAKRKLEVTSIEEGEVVDDTVDAKRTTKTPPHSVDRSFEGIRSINKYLTEKALAELVLPCIDRSSADIRGILSVDLTKQMGAISEHIKAIALNGAKQAGSVSSGNEVPSNKSSGRRGIRGGSPNIGRRAPVGNDPSPPSASALRAALWLRLQFIIRLLPVIMADRSMRHTLASAILGLLATRMIYEDADLPLPPTNATALRRDVDSLLEPPLDVLLDRPGESLFEKLLCVLHALLGSYKPSWLKSRSASRSSIKSQRDFSAFDNEAAEGLQSALDHMELPETIRRRIQAAMPLLPPSRRPCMQCQPPQLSLAALSPLQSSTSGVGPQQKSSCVSWVPTNVSVRSKAALPSHDPETEVDPWSLLEDGTNCPPSTASGSNGSSGVTGDHANLKASSWLKGAVRVRRTELTYIGSVDDDS |
Length | 2195 |
Position | Kinase |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.265 |
Instability index | 48.43 |
Isoelectric point | 8.75 |
Molecular weight | 243240.18 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP09843
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.39| 26| 64| 982| 1043| 1
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1012- 1038 (41.43/88.05) LPLQPDDKTASKWRLgDEELLSVLYVL
1968- 1993 (45.96/10.68) LPLPPTNATALRRDV.DSLLEPPLDVL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 162.63| 40| 63| 2081| 2121| 2
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748- 774 (27.18/ 9.27) .....RLVLSELSCGHSfYASGRGEYTSSSCI..........
2081- 2121 (70.96/40.02) QCqPPQLSLAALSPLQS.STSGVGPQQKSSCVSWVPTNVSVR
2146- 2181 (64.49/32.38) NC.PP..STASGSNGSS.GVTGDHANLKAS..SWLKGAVRVR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 48.22| 16| 64| 982| 1003| 3
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982- 1003 (23.90/25.62) SVSS.....WLLKSIRqlvdgnGMTAS
1044- 1064 (24.31/11.98) SVSGvkfliWLLVKIR......GVGSS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 504.71| 160| 304| 483| 660| 4
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483- 660 (243.06/222.02) KALVTGNLSVAYFSLfndLSDALMEerwIK.EVNPCLQSSLMWIGTVELSLICSiffLCEWATCDYRDCRASPSQNVKF..TGRRDLSQIHMAvsilkNKMDEMNNLSRPKSSTRIT...LNKVAKGSLNDACLTAAAVDDSSGlrSNAKNVDEKKDTNDIFEsPGPLHDiIVCWLDQHEVSNV
800- 965 (261.64/184.26) KALLSSLLGFTYPPL...VESKLCE...IKtSFQESVTSTLTQVETGEAKSGCE...DCMRSKGQKLDDSATPFQGFPLiqSGEEDIWWVKKG.....TKLQESFNVEPVQKSVKQTsrgRAKVVRKTQSLAQLAAARIEGSQG..ASTSHVCESKMSCPHHE.PNNDGD.NVKDFDHTRAANV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 102.61| 33| 63| 1379| 1411| 6
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1379- 1411 (52.64/39.80) TSELSNSGKGF.VGRTAKVSAAISALVVG...AVVHG
1441- 1477 (49.97/37.33) TNGVSHPTGGFrIENSTEVSVHWFRILLGncrTVYDG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 135.91| 41| 70| 1664| 1706| 7
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1664- 1700 (50.48/27.05) .............................GKTTLESLRS....LSPKAEGFALSDSEKGFTEVILSRLLA
1703- 1772 (47.13/28.42) DAAPlyselvhllgklqeslvmdvkwilqGQDAILGRRStrqqLVHIAQRKGLSTKAQVWKPWGWSSLLS
1773- 1834 (38.29/15.75) DAIPnktakrklevtsieegevvddtvdaKRTTKTPPHS....VDRSFEG..IRSINKYLTEKALAEL..
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 113.02| 38| 433| 1164| 1208| 12
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1164- 1208 (54.44/45.71) AELD.NGRSIDGDlvsssGilAGEEIDEQVRQ.KLNGRSSRLVQNMK
1598- 1637 (58.58/33.35) AIIDcNTPTIQGD.....G..ASEPCDPKDNElKLSERLMQLLDTLQ
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