<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09827
Description |
Mediator of RNA polymerase II transcription subunit 33A |
Sequence | MSRRPYCRWRLGLIVIGKSIAEALQLSKVYGFSGTEFGHVVIMFVLAVVSKLIDSIFEDCGFPSAMVEGQESVNAIDGPQPMDLDVKMGSTENQNEHREQLRRKNTLIALDVLHMMTADRKIQSFLRLIFLNMPERFSSLRQRLSSIEAQKVSLETLLPSGHKINELLINFWRVCKTDYQPNNKHILGVLGNMGSGGSLLGQLTGAGRPACWIIFDIYVENAIDGRHLSVISAIRIIKEMTKTMQVLNEASWQETFKALWISALRLVQRAREPLEGPIPHLDARLCMLLALIPLSVAAILQEESDMLGAEGNKILPQRQGLISSLQDLIQYSGLLVPPSSVVNAANAAASKAAIFKANYEAGVGNSSMMDQTDSSMKAAGNMLHLIIEACISRKLIDTSAYLWPGYVVPSGTLKDTALPQESPWLNFMKGSRLSGPLIDALVASPASSVAELDKLYSIALNGSEEEKTAAAKILCGASLVRGWNIQEHVVGMVVKLLSASLPSDSATSTPGSMSNYLAHMSTLNEILLGVSYGDAIHILSLYGMVPDVAVALMPICEAFGSIPPPPNHKSTILGEISVYTVFSCAFLCLLRLWKFYRPPQEYCLAGRGGSVKLELTLDYLLLMHNNHIEFSNSSASNRDSCNDMGSVNEVPAQLIYIDSFPKLRAWYFQNQACIASPLSGLCNKNPVHQVANKILNMICRKMNKGVVSSSTLSSTSSSSVSGSSVSASDDPCQRPAVSGWEFLEAVPFVLEAVLTACAHGQLSSRDLTTSLRDLVDFLPASLAAIVSYFSAEITRGIWKPVPMNGIEWPSPGASLHSIEAEVKEILASAGVQINSCYPRGVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVGALLGDSITNQGLRLPMAPGFIYLRTCRTFHDTYFVSEVILKQVIEWAHKLANGWCFNGPPQLKSGRTPLSCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETLPTLLLSARDQSLKGPGPVSSTLQGYAMANMLFYCGSLLWGADRTSPVMKLSFLSRRPRVVRTHMDFIAGVLDGHILLGCDPGTWKAYVSQFMFLVVKFVPSWLRDIKLDTLKKIAAGLRSWHEHDLALSLLERGGPQAISVVVETFL |
Length | 1201 |
Position | Tail |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
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Aromaticity | 0.07 |
Grand average of hydropathy | 0.174 |
Instability index | 49.93 |
Isoelectric point | 7.70 |
Molecular weight | 130789.37 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP09827
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 150.42| 44| 140| 931| 979| 3
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138- 177 (54.48/29.10) SSLRQRLSS...IEAQKvSLETLLpsGHKI.NELL.......INFWRVCKT
311- 337 (23.98/ 8.38) .........GNKILPQRqGLISSL..QDLIQYSGLLVP.............
931- 978 (71.96/52.47) SSFLQSSSSGSDIIANR.GVGALL..GDSITNQGLRLPmapgFIYLRTCRT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 528.41| 177| 340| 362| 559| 4
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362- 559 (255.08/257.52) GVGNSSMMDQTDSSmKAAGNMLHLIIEACiSRKLIDTSAYLWPGYVVPSGTLKDTALPQESPwLNFMKGSRlsgPLIDALVASPASSV....AELDK.LYS.IALNGSEEEKTaaakilcGASL..VRGwNIQEHVVGMVVKlLSASLPSDSATSTPGSMSNYLAHMSTLN.....EILLGVsYGDAIHILSLYGMVPDvavalMPICEAF
705- 894 (273.33/205.92) GVVSSSTLSSTSSS.SVSGSSVSASDDPC.QRPAVSGWEFLEAVPFVLEAVLTACAHGQLSS.RDLTTSLR...DLVDFLPASLAAIVsyfsAEITRgIWKpVPMNGIEWPSP.......GASLhsIEA.EVKEILASAGVQ.INSCYPRGVPPMLPLPMAALVSLTITFKldrslEYIQGV.IGQALENCAGGSSWPS.....MPIIGAL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 134.20| 42| 336| 643| 691| 5
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643- 691 (64.60/61.68) DMGSVNEVPAQLIyIDSFPKL.RAWYFQNQA...ciasPLSglCNKNPVHQVA
981- 1030 (69.60/43.69) DTYFVSEVILKQV.IEWAHKLaNGWCFNGPPqlksgrtPLS..CAASMVQQVA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 172.80| 52| 1099| 1| 59| 9
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1- 59 (80.98/62.67) MSRRP.YCRWRLGLivigksIAEALQLSKVYGFSGTEFGHVVIMFVLAVVsKLIDSIFED
1107- 1159 (91.83/54.71) LSRRPrVVRTHMDF......IAGVLDGHILLGCDPGTWKAYVSQFMFLVV.KFVPSWLRD
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