<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09822
Description |
Mediator of RNA polymerase II transcription subunit 33A |
Sequence | MAAVKASEARGDPPLLQVVELSRIVAVEGAGTLSSADLARILVSNLCFAHNSPSLWKLLGQAVVSRLLCPLHVLALLTPRVLPQRRAQPEAYRLYLELLKCHVTSSLLSMEAGPNRDKIGKSIAEALQLSKVYGFSGTEFGHVVIMFVLAVVSKLIDSIFEDCGFPSAMVEGQESVNAIDGPQPMDLDVKMGSTENQNEHREQLRRKNTLIALDVLHMMTADRKIQSFLRLIFLNMPERFSSLRQRLSSIEAQKVSLETLLPSGHKINELLINFWRVCKTDYQPNNKHILGVLGNMGSGGSLLGQLTGAGRPACWIIFDIYVENAIDGRHLSVISAIRIIKEMTKTMQVLNEASWQETFKALWISALRLVQRAREPLEGPIPHLDARLCMLLALIPLSVAAILQEESDMLGAEGNKILPQRQGLISSLQDLIQYSGLLVPPSSVVNAANAAASKAAIFKANYEAGVGNSSMMDQTDSSMKAAGNMLHLIIEACISRKLIDTSAYLWPGYVVPSGTLKDTALPQESPWLNFMKGSRLSGPLIDALVASPASSVAELDKLYSIALNGSEEEKTAAAKILCGASLVRGWNIQEHVVGMVVKLLSASLPSDSATSTPGSMSNYLAHMSTLNEILLGVSYGDAIHILSLYGMVPDVAVALMPICEAFGSIPPPPNHKSTILGEISVYTVFSCAFLCLLRLWKFYRPPQEYCLAGRGGSVKLELTLDYLLLMHNNHIEFSNSSASNRDSCNDMGSVNEVPAQLIYIDSFPKLRAWYFQNQACIASPLSGLCNKNPVHQVANKILNMICRKMNKGVVSSSTLSSTSSSSVSGSSVSASDDPCQRPAVSGWEFLEAVPFVLEAVLTACAHGQLSSRDLTTSLRDLVDFLPASLAAIVSYFSAEITRGIWKPVPMNGIEWPSPGASLHSIEAEVKEILASAGVQINSCYPRGVPPMLPLPMAALVSLTITFKLDRSLEYIQGVIGQALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCMRSPFGRDKDAVAQLIQSCFSSFLQSSSSGSDIIANRGVGALLGDSITNQGLRLPMAPGFIYLRTCRTFHDTYFVSEVILKQVIEWAHKLANGWCFNGPPQLKSGRTPLSCAASMVQQVALLGGGLLCIAGGPLVVQVLYEETLPTLLLSARDQSLKGPGPVSSTLQGYAMANMLFYCGSLLWGADRTSPVMKLSFLSRRPRVVRTHMDFIAGVLDGHILLGCDPGLFRVLNVPAVPEGDHTEGPGWAGLPRRHGHRKRQVHLLSDSPTGYEENSCRCKPSSVPDARPGYEFKTKRCEI |
Length | 1312 |
Position | Tail |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
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Aromaticity | 0.07 |
Grand average of hydropathy | 0.116 |
Instability index | 49.83 |
Isoelectric point | 7.83 |
Molecular weight | 142442.44 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP09822
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 1063.98| 299| 334| 616| 949| 1
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419- 613 (192.38/104.13) .........................................................................................................................................................PQRQGLISSLQDL....IQYSGLL......VPPS.SVV...NA................ANAAASKA.AIFKANYEAG..VGNSSMMDQTDSSmKAAGNMLHLIIEACiSRKL.IDTSAYLWPGYVVPSGTLKDTALPQESPwLNFMKGS.............RlsgPLIDALVASP.ASSV....AELDK.LYS..IALNGSEEEKTaaakilcG.ASL.....VRGwNIQEHVVGM..VVKlLSASLPSDSATSTP
616- 949 (480.27/361.59) MSNYLAHMSTLN.....EILLGVsYGDAihilslygmvpdvavalMPICEAFGSIPPPPnhkstILGEISVYTVFS.CAFLCLlrlwKFYRPPqeyclAGRGGSVKLELTLD.YLLLMHNNHiefSNSS.ASNR.......DSCNDMGSVNEVPAQLIYIDSFPKLRAWYFQNQACI......ASPL.SGLCNKNP................VHQVANKILNMICRKMNKG..VVSSSTLSSTSSS.SVSGSSVSASDDPC.QRPA.VSGWEFLEAVPFVLEAVLTACAHGQLSS.RDLTTSL.............R...DLVDFLPASL.AAIVSYFSAEITRGIWKP.VPMNGIEWPSP.......G.ASL...HSIEA.EVKEILASA..GVQ.INSCYPRGVPPMLP
952- 1297 (391.33/238.80) MAALVSLTITFKldrslEYIQGV.IGQA.................LENCAGGSSWPSMP.....IIGALWTQKVRRwHDFIVL....SCMRSP.....FGRDKDAVAQLIQScFSSFLQSSS...SGSDiIANRgvgallgDSITNQGLRLPMAPGFIYLRTCRTFHDTYFVSEVILkqviewAHKLaNGWCFNGPpqlksgrtplscaasmVQQVALLGGGLLC..IAGGplVVQ..VLYEETLP.TL...LLSARDQSL.KGPGpVSS..TLQG..YAMANMLFYCG.SLLWG.ADRTSPVmklsflsrrprvvR...THMDFIAGVLdGHILLGCDPGLFRVLNVPaVP.EGDHTEGP.......GwAGLprrHGHRK.RQVHLLSDSptGYE.ENSC..RCKPSSVP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 86.74| 27| 160| 82| 108| 2
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82- 108 (47.69/28.87) LPQRRAQPEAYRLYLELL..KCHVTSSLL
243- 271 (39.05/22.41) LRQRLSSIEAQKVSLETLlpSGHKINELL
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