<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09788
Description |
Mediator of RNA polymerase II transcription subunit 23 |
Sequence | MVQGVSVTGGGSVTPSSAITMPNAPNFHQSNPASPLSVMNTIGSPTQSGIDQPVGANVSPIKAAEFSSSAQLGTAARGDQSRRGAEASYLHHLSCRIILAGLEFNLKPATHAVIFQHMVNWLVNWDQRPQGMDETDTMQTCRLEKPLHEWMHLCLDVIWILVNEDKCRIPFYELVRCNLQFLENIPDDEALVSIIMEIHRRRDMVCMHMQMLDQHLHCPTFGTHRFLSQSYPSIAGESVTNLRYSPITYPSVLGEPLHGEDLANSIPKGGLDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRSQSQQSSTPGAVFSPDMIGEAVADRTIELLKLTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVTNSDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVDTTRKIISFHKEDKSLDANNIGPQSILLDFISSSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWKQMMKASGERMIDFTNLDERATGMFWVLSFTMAQPACEAVMNWFTSAGMADLIQGPNMQPSERIMMMRETYPLSMSLLSGLSINLCLKLAYQLEETIFLGQAVPSIAMVETYVRLLLIAPHSLFRPHFTALTQRSPSILSKSGVSLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKGKRGEHRLFRLAENLCMNLILSLKDFFFVKKELKGPTEFTETLNRITIISLAITIKTRGIAEVEHMIYLQPLLEQIMATSQHTWSEKTLRYFPPLIRDFLMGRVDKRGLAIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLSHSFPQHRQYLCAGAWMLMNGHLEINSANLARVLREFSPEEVTANIYTVVDVLLHHIQCEVQRGHLAQDLLSKAITNLSFFIWTHELLPLDILLLALIDRDDDPYALRLVISLLEKPELQQRVKNFCNTRSPEHWLKNQHPKRAELQKALGSHLSWKDRYPPFFDDIAARLLPVIPLIIYRLIENDATDIADRVLAFYSSLLAFHPLRFTFVRDILAYFYGHLPIKLIGRILNLLGVSTKTPFSESFAKYLVSSNSSICPPPEYFANLLLNLVNNVIPPLSSKSKSNPADTTRSTFNKHHASSQPGGVGNTDGQRAFYQNQDPGSYTQLVLETAAIEILSLPVPAAQIVSSLVQIIAHVQAILIQSNSGQGMSGGLGQSSGLPTSPSGAAESSGPNQANSAATGINATNFVSRSGYSCQQLSVLMIQACGLLLAQLPPEFHMQLYSEAARVIKDCWWLADGSRPVKELDSAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPQEWLESTHTVIKHLRPVNSVAMLRIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNPQVSNPNPVEASEIADIIDFLHHAVMYEGQGGPVQSTSKPKLEILTLCGKVIEILRPDVQHLLSHLKIDPTSSIYAATHPKLVQNPS |
Length | 1456 |
Position | Tail |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.039 |
Instability index | 43.11 |
Isoelectric point | 6.87 |
Molecular weight | 163269.55 |
Publications | PubMed=19965430
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:EnsemblPlants
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GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP09788
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 134.54| 42| 347| 226| 270| 1
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226- 270 (63.81/60.26) FLSQSYPSIAgESVTNLRYSPITyPSVLGEPlHGEDLANSIP....KGG
576- 621 (70.73/49.82) FLGQAVPSIA.MVETYVRLLLIA.PHSLFRP.HFTALTQRSPsilsKSG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 124.19| 39| 347| 354| 392| 2
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354- 392 (68.55/61.04) FFFLMK..SGCIDFLDFVDKLAS...RVTNSDQQILRSNHVTWL
685- 728 (55.64/47.77) FFFVKKelKGPTEFTETLNRITIislAITIKTRGIAEVEHMIYL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 83.34| 26| 347| 996| 1025| 3
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997- 1025 (39.17/32.67) AFYSSLLaFHPLRFTFvrDILAYFYGHLP
1345- 1370 (44.17/21.73) AFARPLF.MKTLALLF..NVLGDVFGKNP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 53.06| 14| 16| 1039| 1052| 7
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1039- 1052 (25.22/13.23) STKTPFSESFAKYL
1057- 1070 (27.84/15.35) SSICPPPEYFANLL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 216.12| 67| 534| 840| 907| 15
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840- 907 (112.59/95.71) PEEVTA.NIYTVVDVLLHHIQCEVQRGHLaQDLLSKAITNLSFFIWTHELLPLDI..LLLAL.IDRDDDPYA
1375- 1445 (103.53/82.39) PNPVEAsEIADIIDFLHHAVMYEGQGGPV.QSTSKPKLEILTLCGKVIEILRPDVqhLLSHLkIDPTSSIYA
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