<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09772
Description |
Mediator of RNA polymerase II transcription subunit 23 |
Sequence | MDGGHTTRHPMSPAISASTVLPQQRQMQPHHHPARPAIADLFTLYLGVRASLAPKFLISSRVGVSLLVLTLGVVGLQMNSKQRAEDPLRESSNKLQKRVTALNRDLPPRDEQFISDYEQLRMQFPDAEQLQAITESVLISFVLQCSSHAPQSEFLLFATRCLCARGHLRWDSLLPSLLNTVSSIEAPMVQGVSVTGGGSVTPSSAITMPNAPNFHQSNPASPLSVMNTIGSPTQSGIDQPVGANVSPIKAAEFSSSAQLGTAARGDQSRRGAEASYLHHLSCRIILAGLEFNLKPATHAVIFQHMVNWLVNWDQRPQGMDETDTMQTCRLEKPLHEWMHLCLDVIWILVNEDKCRIPFYELVRCNLQFLENIPDDEALVSIIMEIHRRRDMVCMHMQMLDQHLHCPTFGTHRFLSQSYPSIAGESVTNLRYSPITYPSVLGEPLHGEDLANSIPKGGLDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRSQSQQSSTPGAVFSPDMIGEAVADRTIELLKLTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVTNSDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVDTTRKIISFHKEDKSLDANNIGPQSILLDFISSSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWKQMMKASGERMIDFTNLDERATGMFWVLSFTMAQPACEAVMNWFTSAGMADLIQGPNMQPSERIMMMRETYPLSMSLLSGLSINLCLKLAYQLEETIFLGQAVPSIAMVETYVRLLLIAPHSLFRPHFTALTQRSPSILSKSGVSLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKGKRGEHRLFRLAENLCMNLILSLKDFFFVKKELKGPTEFTETLNRITIISLAITIKTRGIAEVEHMIYLQPLLEQIMATSQHTWSEKTLRYFPPLIRDFLMGRVDKRGLAIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLSHSFPQHRQYLCAGAWMLMNGHLEINSANLARVLREFSPEEVTANIYTVVDVLLHHIQCEVQRGHLAQDLLSKAITNLSFFIWTHELLPLDILLLALIDRDDDPYALRLVISLLEKPELQQRVKNFCNTRSPEHWLKNQHPKRAELQKALGSHLSWKDRYPPFFDDIAARLLPVIPLIIYRLIENDATDIADRVLAFYSSLLAFHPLRFTFVRDILAYFYGHLPIKLIGRILNLLGVSTKTPFSESFAKYLVSSNSSICPPPEYFANLLLNLVNNVIPPLSSKSKSNPADTTRSTFNKHHASSQPGGVGNTDGQRAFYQNQDPGSYTQLVLETAAIEILSLPVPAAQIVSSLVQIIAHVQAILIQSNSGQGMSGGLGQSSGLPTSPSGAAESSGPNQANSAATGINATNFVSRSGYSCQQLSVLMIQACGLLLAQLPPEFHMQLYSEAARVIKDCWWLADGSRPVKELDSAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPQEWLESTHTVIKHLRPVNSVAMLRIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNPQVSNPNPVEASEIADIIDFLHHAVMYEGQGGPVQSTSKPKLEILTLCGKVIEILRPDVQHLLSHLKIDPTSSIYAATHPKLVQNPS |
Length | 1643 |
Position | Tail |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.051 |
Instability index | 45.55 |
Isoelectric point | 7.10 |
Molecular weight | 184055.24 |
Publications | PubMed=19965430
|
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central
transcription regulator complex GO:0005667 IBA:GO_Central
|
GO - Biological Function | |
GO - Biological Process | positive regulation of gene expression GO:0010628 IBA:GO_Central
regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP09772
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 53.84| 15| 15| 1235| 1249| 1
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1235- 1249 (27.77/15.29) FAKYLVSSNSSICPP
1253- 1267 (26.07/13.92) FANLLLNLVNNVIPP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 51.32| 19| 23| 1165| 1186| 3
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1165- 1186 (22.82/24.74) LIIYRLIEndATDIADrVLA.FY
1189- 1208 (28.50/16.59) LLAFHPLR..FTFVRD.ILAyFY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.64| 13| 15| 412| 424| 4
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412- 424 (24.35/12.23) RFLSQSYPSIAGE
430- 442 (25.28/12.96) RYSPITYPSVLGE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 59.27| 16| 18| 1351| 1366| 5
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1351- 1366 (29.56/19.25) LIQSNSGQGMSGGLGQ
1370- 1385 (29.71/19.39) LPTSPSGAAESSGPNQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 74.98| 22| 23| 202| 223| 7
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202- 223 (40.75/24.77) PSSAITMPNAPNFHQSNPA..SPL
225- 248 (34.23/19.53) VMNTIGSPTQSGIDQPVGAnvSPI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 58.73| 18| 23| 460| 477| 8
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460- 477 (36.48/23.27) WERAL...RCLRHALR..TTP....SP
480- 506 (22.25/10.98) WRRVLlvaPCYRSQSQqsSTPgavfSP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 40.90| 11| 23| 328| 341| 9
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328- 341 (17.26/18.14) CRLekPLHEWMHlC
354- 364 (23.65/12.08) CRI..PFYELVR.C
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 38.89| 10| 18| 1119| 1129| 11
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1119- 1129 (17.92/15.51) SPEHWlKNQHP
1140- 1149 (20.97/12.62) SHLSW.KDRYP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 37.39| 10| 20| 914| 923| 12
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914- 923 (18.02/ 8.32) YLQPLLEQIM
937- 946 (19.37/ 9.47) YFPPLIRDFL
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