<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09759
Description |
ATP-dependent DNA helicase |
Sequence | MLICATVIPCRLHLKKLVQLLEDHMTRSAQDEERQISHSMASTTSTQQHLPPMTPGSTFTMDSNRFQSQVYVGNGPRDSDLCYSPAPYSCSDNLSTPLNSVWKSYTPKVIDINYTEGSGDRKWSSTNFPWTKELEAKNRNKFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALISSGLTLVVCPLVSLIQDQIMHLSQANIPATYLSGNLDWSEQQEIMKDLMSCRYKLLYVTPEKIAKSGALSRLLDNLNSQGHLSRIVIDEAHCVSQWGHDFRPDYKSLGVLKQNFPKTPVLALTATATARVKEDVVQALALENCIVFKQSFNRANLRYYLRPKTKKCVEDIDLFIRTNHSKECGIIYCLSRMDCEKVAEKLRDCGHKVSHYHGSMDPMDRTHIQKLWSKDKINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQPSSCVLYYQYSDYIRVRHMITQGVTEQTGAPRDLSSHEQALKTHKDNLLRMVSYCENDVDCRRLLQLIHFGEKFDPSLCARTCDNCLKESGWVEKDVTNIARQLVELVTRTGHSHSSTYILEVYRGSMSQNVKKQRHDALALHGAGRHLAKGEAARIMRHLVTEEILNEDVKKSDMYGSISSVLKEKKKKSYFDLFFLYPGWFRFPASDKASKMRNLDASLLPQTNKNVQQQSEVDVKLASMLYEALLSLREQIMEECNEGFNAYHIFKTDTLKEMSIRVPRTKEELLDINGLGKTKVKKYGDRLLATIEDFLSKHPNPRRNSGGGGGGNEHSDAAKKRRGSTAISAASYGDYDFDERTGQQSKKRAAKTRTVSAHGPRCTDADLDGPEVVEVDGELRSVRKPVAYGNGRVLPNCTLELWRRMYVQLVHASRTYETRSKSSVACFRGQHRDRSVGHLLPETSWMQELREVRAFRCPPFVAAGAHPLEPPVPRRVLRATGAVKTRPRDHRYCKDSAGYGNGSGG |
Length | 983 |
Position | Unknown |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
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Aromaticity | 0.07 |
Grand average of hydropathy | -0.542 |
Instability index | 43.58 |
Isoelectric point | 9.12 |
Molecular weight | 110935.18 |
Publications | PubMed=19965430
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Function
Annotated function |
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GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
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GO - Biological Function | 3'-5' DNA helicase activity GO:0043138 IEA:InterPro
ATP binding GO:0005524 IEA:UniProtKB-KW
hydrolase activity GO:0016787 IEA:UniProtKB-KW
nucleic acid binding GO:0003676 IEA:InterPro
|
GO - Biological Process | DNA recombination GO:0006310 IEA:InterPro
DNA repair GO:0006281 IEA:InterPro
DNA replication GO:0006260 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP09759
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 536.31| 138| 141| 368| 506| 1
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237- 363 (153.73/100.86) ..YKLLYVTPEKIAKSgalSRLLDNLNSQGHLSR..IVIDEAHCVSQW.GHD..................F.RPDYKSlgVLKQNFPKTpvLALTATATAR..............VKEDvVQAlalENCIVFKQSFNRANL.RYYL.RPKTKKCVEDIDL......FIRTNHS
368- 506 (238.62/165.53) IIYCLSRMDCEKVAEK...LRDCGHKVSHYHGSM..DPMDRTHIQKLW.SKDKINIICATVAF....GMGInKPDVRF..VIHHSLPKS..IEGYHQECGR..............AGRD.GQP...SSCVLYYQYSDYIRV.RHMITQGVTEQTGAPRDL.SSHEQALKTHKD
512- 648 (143.96/93.94) VSYCENDVDCRRLL.Q...LIHFGEK...FDPSLcaRTCDNCLKESGWvEKDVTNIARQLVELvtrtGHS.............HSSTYI..LEVYRGSMSQnvkkqrhdalalhgAGR.............HLAKGEAARImRHLVTEEILNEDVKKSDMyGSISSVLKEKK.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 161.39| 49| 96| 73| 124| 2
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73- 124 (88.58/62.97) GNGprdSDLCYS.PAPYSCSDNLST.PLNSVWKSYTPKV..IDINYTEGSGDRKWS
171- 223 (72.82/43.74) GGG...KSLTYQlPALISSGLTLVVcPLVSLIQDQIMHLsqANIPATYLSGNLDWS
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