Description | Pre-mRNA-processing protein 40C |
Sequence | MQVLLPYRQDAGASSAPSALATSSATSELNGSKPADAALKGQLVANNGEKLKDNNGDVNISDSSSDSDDEEHGPSKEDCIRQFKVMLKERGVAPFSKWEKELPKIVFDPRFKAIPSHSTRRAIFDHYVRTRAEEERKEKRAALKAAVEAYKELLEEASEDINQKTDYQEFKRKWGADTRFEALDRKEREILFSEKVKAVQEKVQSMRKAVIANFKSMLRESKDITSTSRWAKVKENFRSDPRYKAMKHEERETIFNEYIVELKSAEQEAEQAAKAKVDEQAKLKERERETRKRKEREEQEMERVKMKIRRKEAVSSYQALLVEMIKDPKASWTESKPKLEKDPQGRARNPDLGQGDAEKLFRDHVKDLYERCVRDFRALLSEVITPEVAARTTAEGKTAINSWSEAKGHLRSDLRYNKLPSKDKESIWRRYADDLTRKLRQSDTKEKDKSDTDGKQPRSSDPPRRR |
Length | 466 |
Position | Unknown |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea. |
Aromaticity | 0.06 |
Grand average of hydropathy | -1.145 |
Instability index | 39.52 |
Isoelectric point | 9.28 |
Molecular weight | 53858.93 |
Publications | PubMed=19965430 |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP09751 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 402.12| 97| 129| 76| 172| 1 --------------------------------------------------------------------------- 76- 172 (156.60/83.94) KEDCIRQFKVMLKE.RGVAPFSKWEKELPKIVFDPRFKA.IP..SHSTRRAIFDHY.VRTRAEEERKEKRAALKAAV..EAYKELLEEASEDINQKT.DYQEFKR 207- 303 (127.52/67.07) RKAVIANFKSMLREsKDITSTSRWAKVKENFRSDPRYKA.M...KHEERETIFNEYiVELKSAEQEAEQ.AA.KAKV..DEQAKLKERERETRKRKErEEQEMER 310- 407 (117.99/61.54) RKEAVSSYQALLVE.MIKDPKASWTESKPKLEKDPQGRArNPdlGQGDAEKLFRDH.VKDLYERCVRDFRALLSEVItpEVAARTTAEGKTAIN....SWSEAK. --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 50.41| 15| 23| 410| 424| 3 --------------------------------------------------------------------------- 410- 424 (25.81/14.87) LRSDLRYNKLPSKDK 435- 449 (24.61/13.86) LTRKLRQSDTKEKDK --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) AALKGQLVA 2) KLRQS 3) KQPRSSDPPRRR 4) MQVLLPYRQD 5) SIWRRYADD | 37 438 455 1 426 | 45 442 466 10 434 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab