<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09730
Description |
Lycopene epsilon cyclase1 |
Sequence | MQGGPLSPDEYWVISPPALLHQPASTIVVAIDRDRNSQLAVKWVVDHLLSGASHIVLLHVAVHYHTTRTSFISRTHFASAAAAAELWFAWTCADGFAMVETTQGALEAEMKEIFVPYRGFFNRNGVEVSEVVLEEADVSKAILGYITANKIQSIALGGANRNAFTKKFKNADVPSTLMKCAPDYCNIYVVAKGKSVNVRLAKCGVPPMHTGADIASDTDSLRESVLYMRRGSRGHLPRVTPDAWRSIDGRTPPELSTRPLFRERLLSSSATTKNFVVLPGKDNFETSSRSARHDSLGGDLDFGPSTRFSYIDLGENLDMSTTLPALEPMSPATGAQRDTEAEMRRLRLELKQTMDMYNAACKEAINAKQRAKEMHMMKLEEARRLEEARNAEEAALAVAEMEKAKCRAAMEAAEAAQRLADLEAQRRRNAEVRARREADEKVRALDAISNHDFRYRKYHIDEIEMATERFSDELKIGEGGYGPVYRASLDHTPVAIKVLRPDAHQGRKQFLQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMDHGSLEDRLFRRGGTPPLAWAQRFRIAAEIATALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADNVTQYRLTATAGTFCYIDPEYQQTGKLGVKSDIYSLGVLLLQVVTARPPMGLTHHVEKAIDAGTFEQMLDITVKDWPVEEALGYAKLALKCTEMRRRDRPDLATVILPELNRLRNLGHAYEARMSAARANGGSGESGAQISGDSTTVGGSWETADS |
Length | 779 |
Position | Tail |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
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Aromaticity | 0.07 |
Grand average of hydropathy | -0.317 |
Instability index | 42.35 |
Isoelectric point | 6.65 |
Molecular weight | 86364.40 |
Publications | PubMed=19965430
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Function
Annotated function |
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GO - Cellular Component | |
GO - Biological Function | ATP binding GO:0005524 IEA:InterPro
protein kinase activity GO:0004672 IEA:InterPro
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GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP09730
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.52| 20| 28| 385| 412| 1
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393- 412 (34.15/30.49) EAALAVAEME.....KAKCRAAMEA
414- 438 (26.37/ 8.04) EAAQRLADLEaqrrrNAEVRARREA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 42.94| 12| 22| 169| 180| 2
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169- 180 (22.19/13.18) KNADVPSTLMKC
192- 203 (20.75/11.91) KGKSVNVRLAKC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 63.25| 24| 30| 336| 359| 3
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313- 349 (32.39/22.52) LGENLDMSTTlpalepmspatgaQRDTEAEMRRL....RLE
350- 386 (30.86/21.10) LKQTMDMYNA....ackeainakQRAKEMHMMKLeearRLE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 86.06| 26| 28| 233| 258| 4
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233- 258 (47.92/28.25) RGHL..PRVTPDAWRSIDGRTPPELSTR
262- 289 (38.15/21.13) RERLlsSSATTKNFVVLPGKDNFETSSR
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