<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP09725
Description |
Lycopene epsilon cyclase1 |
Sequence | MQGGPLSPDEYWVISPPALLHQPASTIVVAIDRDRNSQLAVKWVVDHLLSGASHIVLLHVAVHYHTTHGFAMVETTQGALEAEMKEIFVPYRGFFNRNGVEVSEVVLEEADVSKAILGYITANKIQSIALGGANRNAFTKKFKNADVPSTLMKCAPDYCNIYVVAKGKSVNVRLAKCGVPPMHTGADIASDTDSLRESVLYMRRGSRGHLPRVTPDAWRSIDGRTPPELSTRPLFRERLLSSSATTKNFVVLPGKDNFETSSRSARHDSLGGDLDFGPSTRFSYIDLGENLDMSTTLPALEPMSPATGAQRDTEAEMRRLRLELKQTMDMYNAACKEAINAKQRAKEMHMMKLEEARRLEEARNAEEAALAVAEMEKANAEVRARREADEKVRALDAISNHDFRYRKYHIDEIEMATERFSDELKIGEGGYGPVYRASLDHTPVAIKVLRPDAHQGRKQFLQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMDHGSLEDRLFRRGGTPPLAWAQRFRIAAEIATALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADNVTQYRLTATAGTFCYIDPEYQQTGKLGVKSDIYSLGVLLLQVVTARPPMGLTHHVEKAIDAGTFEQMLDITVKDWPVEEALGYAKLALKCTEMRRRDRPDLATVILPELNRLRNLGHAYEARMSAARANGGSGESGAQISGDSTTVGGSWETADS |
Length | 729 |
Position | Tail |
Organism | Zea mays (Maize) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
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Aromaticity | 0.07 |
Grand average of hydropathy | -0.325 |
Instability index | 42.68 |
Isoelectric point | 6.45 |
Molecular weight | 80834.19 |
Publications | PubMed=19965430
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Function
Annotated function |
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GO - Cellular Component | |
GO - Biological Function | ATP binding GO:0005524 IEA:InterPro
protein kinase activity GO:0004672 IEA:InterPro
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GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP09725
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 28.01| 9| 28| 19| 28| 1
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19- 28 (11.81/10.48) LLhQPASTIV
48- 56 (16.20/ 8.23) LL.SGASHIV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 79.66| 25| 29| 332| 358| 3
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332- 356 (42.56/29.49) NAACKEAINAKQRAKEMHMMKLEEA
392- 416 (37.10/18.41) VRALDAISNHDFRYRKYHIDEIEMA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 86.06| 26| 28| 207| 232| 4
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207- 232 (47.92/30.37) RGHL..PRVTPDAWRSIDGRTPPELSTR
236- 263 (38.15/22.75) RERLlsSSATTKNFVVLPGKDNFETSSR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.14| 14| 22| 143| 156| 7
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143- 156 (26.40/19.17) KNADVPSTLMKCA..P
166- 181 (20.74/13.45) KGKSVNVRLAKCGvpP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.30| 20| 25| 62| 86| 9
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62- 81 (35.87/30.15) VHYHTTHGFAMVETTQGALE
89- 108 (34.43/16.75) VPYRGFFNRNGVEVSEVVLE
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